Evidence map›Paper›PMID 26739067›Full record

ArticleVirology journal2016

Molecular detection of Porcine astrovirus in Sichuan Province, China.

Yuhan Cai, Wenqi Yin, Yuanchen Zhou, Bi Li, Lun Ai, Meng Pan, Wanzhu Guo

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 52 citations in OpenAlex.

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  4. Multiplex gel-based PCR assay for the simultaneous detection of 5 genotypes of porcine astroviruses.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yuhan CaiLivestock and Poultry Biological Products Key Laboratory of Sichuan Province, Huashen Veterinary Biological Products Co., LTD, Chengdu, 610299, China.
Wenqi YinLivestock and Poultry Biological Products Key Laboratory of Sichuan Province, Huashen Veterinary Biological Products Co., LTD, Chengdu, 610299, China.
Yuanchen ZhouLivestock and Poultry Biological Products Key Laboratory of Sichuan Province, Huashen Veterinary Biological Products Co., LTD, Chengdu, 610299, China. abtczyc@163.com.
Bi LiLivestock and Poultry Biological Products Key Laboratory of Sichuan Province, Huashen Veterinary Biological Products Co., LTD, Chengdu, 610299, China.
Lun AiLivestock and Poultry Biological Products Key Laboratory of Sichuan Province, Huashen Veterinary Biological Products Co., LTD, Chengdu, 610299, China.
Meng PanInstitute of Animal Nutrition, Sichuan Academy of Animal Science, Chengdu, 610299, China.
Wanzhu GuoAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611134, China.
Sichuan Animal Science Academy · CNSichuan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPorcine astrovirus (PoAstV) is widely distributed worldwide, and is highly prevalent among piglets with or without diarrhea, existing as at least five distinct lineages (PoAstV1-PoAstV5) within the genus Mamastrovirus. However, our knowledge of the diversity and epidemiology of PoAstV in China is limited.

resultsIn this study, fecal samples from 21/120 (17.5 %) domestic pigs, including 18/100 (18 %) diarrheic and 3/20 (15 %) healthy pigs, and from 1/9 (11.1 %) healthy wild boars tested in Sichuan Province were positive for PoAstV on reverse transcription-PCR. Of the 22 positive samples, 13.6 % were positive for PoAstV only, whereas 40.9 % also contained Porcine epidemic diarrhea virus (PEDV), 22.7 % also contained porcine group A rotavirus (PRoVA), and 22.7 % also contained PEDV and PRoVA. A phylogenetic analysis of the RdRp gene revealed genetic heterogeneity among the PoAstV sequences and two lineages were detected in this study, with PoAstV-2 predominant. PoAstV-5 was detected in wild boars for the first time.

conclusionsPoAstV infections exist in Sichuan Province regardless of the disease status in the pig population, either alone or in combination with other enteric viruses, and may be associated with diarrhea.

Indexed as

AnimalsAstroviridae InfectionsChinaFecesMamastrovirusPhylogenyRNA, ViralSus scrofaSwineSwine DiseasesRNA, Viral

Identifiers

PMID26739067
PMCPMC4704384
OpenAlexW2230294688

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.