Evidence map›Paper›PMID 26735137›Full record

ArticlePLoS pathogens2016

Characterization of RyDEN (C19orf66) as an Interferon-Stimulated Cellular Inhibitor against Dengue Virus Replication.

Youichi Suzuki, Wei-Xin Chin, Qi'En Han, Koji Ichiyama, Ching Hua Lee, Zhi Wen Eyo, Hirotaka Ebina, Hirotaka Takahashi, Chikako Takahashi, Beng Hui Tan and 10 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 1 synthesis or guideline pooled it, 123 citations in OpenAlex.

  1. Pooled it
  2. Nutrients · 2021
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  13. MITD1 is a brain-specific interferon-inducible factor that inhibits flavivirus replication.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Subgenomic flaviviral RNAs and human proteins:Computational and structural biotechnology journal · 2024
    Article
  15. Review
  16. Article
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18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 2 countries.

Youichi SuzukiDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Wei-Xin ChinDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Qi'En HanDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Koji IchiyamaDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Ching Hua LeeDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Zhi Wen EyoDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Hirotaka EbinaLaboratory of Viral Pathogenesis, Institute for Virus Research, Kyoto University, Kyoto, Japan.
Hirotaka TakahashiProteo-Science Center, Ehime University, Matsuyama, Japan.
Chikako TakahashiProteo-Science Center, Ehime University, Matsuyama, Japan.
Beng Hui TanDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Takayuki HishikiLaboratory of Primate Model, Experimental Research Center for Infectious Diseases, Institute for Virus Research, Kyoto University, Kyoto, Japan.
Kenji OhbaDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Toshifumi MatsuyamaDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Yoshio KoyanagiLaboratory of Viral Pathogenesis, Institute for Virus Research, Kyoto University, Kyoto, Japan.
Yee-Joo TanDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Tatsuya SawasakiProteo-Science Center, Ehime University, Matsuyama, Japan.
Justin Jang Hann ChuDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Subhash G VasudevanEmerging Infectious Disease Program, Duke-NUS Graduate Medical School, Singapore.
Kouichi SanoDepartment of Microbiology and Infection Control, Osaka Medical College, Takatsuki, Japan.
Naoki YamamotoDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
National University of Singapore · SGEhime University · JPKyoto University · JPDuke-NUS Medical School · SGOsaka Medical and Pharmaceutical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dengue virus (DENV) is one of the most important arthropod-borne pathogens that cause life-threatening diseases in humans. However, no vaccine or specific antiviral is available for dengue. As seen in other RNA viruses, the innate immune system plays a key role in controlling DENV infection and disease outcome. Although the interferon (IFN) response, which is central to host protective immunity, has been reported to limit DENV replication, the molecular details of how DENV infection is modulated by IFN treatment are elusive. In this study, by employing a gain-of-function screen using a type I IFN-treated cell-derived cDNA library, we identified a previously uncharacterized gene, C19orf66, as an IFN-stimulated gene (ISG) that inhibits DENV replication, which we named Repressor of yield of DENV (RyDEN). Overexpression and gene knockdown experiments revealed that expression of RyDEN confers resistance to all serotypes of DENV in human cells. RyDEN expression also limited the replication of hepatitis C virus, Kunjin virus, Chikungunya virus, herpes simplex virus type 1, and human adenovirus. Importantly, RyDEN was considered to be a crucial effector molecule in the IFN-mediated anti-DENV response. When affinity purification-mass spectrometry analysis was performed, RyDEN was revealed to form a complex with cellular mRNA-binding proteins, poly(A)-binding protein cytoplasmic 1 (PABPC1), and La motif-related protein 1 (LARP1). Interestingly, PABPC1 and LARP1 were found to be positive modulators of DENV replication. Since RyDEN influenced intracellular events on DENV replication and, suppression of protein synthesis from DENV-based reporter construct RNA was also observed in RyDEN-expressing cells, our data suggest that RyDEN is likely to interfere with the translation of DENV via interaction with viral RNA and cellular mRNA-binding proteins, resulting in the inhibition of virus replication in infected cells.

Indexed as

Cell LineDengueDengue VirusGene Knockdown TechniquesHumansImmunoblottingImmunoprecipitationInterferonsMass SpectrometryPolymerase Chain ReactionTransfectionViral ProteinsVirus ReplicationInterferonsViral Proteins

Identifiers

PMID26735137
PMCPMC4703206
OpenAlexW2228441468

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.