Evidence map›Paper›PMID 26734118›Full record

ArticleStandards in genomic sciences2016

The complete genome sequence and analysis of a plasmid-bearing myxobacterial strain Myxococcus fulvus 124B02 (M 206081).

Xiao-Jing Chen, Kui Han, Jing Feng, Li Zhuo, Ya-Jie Li, Yue-Zhong Li

Open access · goldAbstract readCase Reports
In one paragraph

Article in Standards in genomic sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 61 citations in OpenAlex.

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  12. Self-identity barcodes encoded by six expansive polymorphic toxin families discriminate kin in myxobacteria.Proceedings of the National Academy of Sciences of the United States of America · 2019
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  14. A Post-segregational Killing Mechanism for Maintaining Plasmid PMF1 in ItsFrontiers in cellular and infection microbiology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xiao-Jing ChenState Key Laboratory of Microbial Technology, School of Life Science, Shandong University, Jinan, 250100 China.
Kui HanState Key Laboratory of Microbial Technology, School of Life Science, Shandong University, Jinan, 250100 China.
Jing FengState Key Laboratory of Microbial Technology, School of Life Science, Shandong University, Jinan, 250100 China.
Li ZhuoState Key Laboratory of Microbial Technology, School of Life Science, Shandong University, Jinan, 250100 China.
Ya-Jie LiState Key Laboratory of Microbial Technology, School of Life Science, Shandong University, Jinan, 250100 China.
Yue-Zhong LiState Key Laboratory of Microbial Technology, School of Life Science, Shandong University, Jinan, 250100 China.
Shandong University · CNState Key Laboratory of Microbial Technology

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myxobacteria, phylogenetically located in the delta division of the Proteobacteria, are well known for characterized social behaviors and large genomes of more than 9 Mb in size. Myxococcus fulvus is a typical species of the genus Myxococcus in the family Myxococcaceae. M. fulvus 124B02, originally isolated from a soil sample collected in Northeast China, is the one and only presently known myxobacterial strain that harbors an endogenous autonomously replicating plasmid, named pMF1. The endogenous plasmid is of importance for understanding the genome evolution of myxobacteria, as well as for the development of genetic engineering tools in myxobacteria. Here we describe the complete genome sequence of this organism. M. fulvus 124B02 consists of a circular chromosome with a total length of 11,048,835 bp and a circular plasmid of 18,634 bp. Comparative genomic analyses suggest that pMF1 has a longstanding sustention within myxobacteria, and probably contributes to the genome expansion of myxobacteria.

Indexed as

Autonomously replicateComplete genome sequenceEndogenous plasmidGenome expansionMyxococcus fulvus 124B02

Identifiers

PMID26734118
PMCPMC4700575
OpenAlexW2225539672

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.