Evidence map›Paper›PMID 26734049›Full record

ArticleFrontiers in plant science2015

A Simple and Fast Kinetic Assay for the Determination of Fructan Exohydrolase Activity in Perennial Ryegrass (Lolium perenne L.).

Anna Gasperl, Annette Morvan-Bertrand, Marie-Pascale Prud'homme, Eric van der Graaff, Thomas Roitsch

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Anna GasperlInstitute of Plant Sciences, Karl-Franzens-Universität Graz Graz, Austria.
Annette Morvan-BertrandNormandie Université, CaenFrance; UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions NCS, Université de Caen NormandieCaen, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions NCSCaen, France.
Marie-Pascale Prud'hommeNormandie Université, CaenFrance; UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions NCS, Université de Caen NormandieCaen, France; INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions NCSCaen, France.
Eric van der GraaffInstitute of Plant Sciences, Karl-Franzens-Universität Graz Graz, Austria.
Thomas RoitschInstitute of Plant Sciences, Karl-Franzens-Universität GrazGraz, Austria; Department of Plant and Environmental Sciences, Copenhagen Plant Science Centre, University of CopenhagenCopenhagen, Denmark.
University of Graz · ATLaboratoire d'Ecophysiologie Végétale, Agronomie & nutritions N.C.S

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite the fact that fructans are the main constituent of water-soluble carbohydrates in forage grasses and cereal crops of temperate climates, little knowledge is available on the regulation of the enzymes involved in fructan metabolism. The analysis of enzyme activities involved in this process has been hampered by the low affinity of the fructan enzymes for sucrose and fructans used as fructosyl donor. Further, the analysis of fructan composition and enzyme activities is restricted to specialized labs with access to suited HPLC equipment and appropriate fructan standards. The degradation of fructan polymers with high degree of polymerization (DP) by fructan exohydrolases (FEHs) to fructosyloligomers is important to liberate energy in the form of fructan, but also under conditions where the generation of low DP polymers is required. Based on published protocols employing enzyme coupled endpoint reactions in single cuvettes, we developed a simple and fast kinetic 1-FEH assay. This assay can be performed in multi-well plate format using plate readers to determine the activity of 1-FEH against 1-kestotriose, resulting in a significant time reduction. Kinetic assays allow an optimal and more precise determination of enzyme activities compared to endpoint assays, and enable to check the quality of any reaction with respect to linearity of the assay. The enzyme coupled kinetic 1-FEH assay was validated in a case study showing the expected increase in 1-FEH activity during cold treatment. This assay is cost effective and could be performed by any lab with access to a plate reader suited for kinetic measurements and readings at 340 nm, and is highly suited to assess temporal changes and relative differences in 1-FEH activities. Thus, this enzyme coupled kinetic 1-FEH assay is of high importance both to the field of basic fructan research and plant breeding.

Indexed as

1-FEHenzymatic activityfructan degradationfructan exohydrolasekinetic assayperennial ryegrass

Identifiers

PMID26734049
PMCPMC4686730
OpenAlexW2260360812

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.