Evidence map›Paper›PMID 26730392›Full record

ArticleOpen forum infectious diseases2016

West Nile Virus Population Structure, Injury, and Interferon-Stimulated Gene Expression in the Brain From a Fatal Case of Encephalitis.

Nathan D Grubaugh, Aaron Massey, Katherine D Shives, Mark D Stenglein, Gregory D Ebel, J David Beckham

Abstract read
In one paragraph

Article in Open forum infectious diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Action tremor and myoclonus as possible early markers in neuroinvasive West nile virus infection: a case series from the 2025 campania outbreak.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nathan D GrubaughDepartment of Microbiology Immunology and Pathology , College of Veterinary Medicine and Biomedical Sciences, Colorado State University , Fort Collins.
Aaron MasseyDepartments of Medicine and Neurology, Division of Infectious Diseases , University of Colorado School of Medicine.
Katherine D ShivesDepartment of Immunology and Microbiology , University of Colorado Anschutz Medical Campus , Aurora.
Mark D StengleinDepartment of Microbiology Immunology and Pathology , College of Veterinary Medicine and Biomedical Sciences, Colorado State University , Fort Collins.
Gregory D EbelDepartment of Microbiology Immunology and Pathology , College of Veterinary Medicine and Biomedical Sciences, Colorado State University , Fort Collins.
J David BeckhamDepartments of Medicine and Neurology, Division of Infectious Diseases, University of Colorado School of Medicine; Department of Immunology and Microbiology, University of Colorado Anschutz Medical Campus, Aurora.

Funding

Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
Quasispecies dynamics in arbovirus persistence emergence and fitnessR01AI067380 · NIAID · UNIVERSITY OF NEW MEXICO · PI Gregory David Ebel · 2007 to 2026
$7.7M
Molecular Pathogenesis of Infectious DiseasesT32AI052066 · NIAID · UNIVERSITY OF COLORADO DENVER · PI VAN DYK, LINDA F. · 2002 to 2022
$2.3M
NCATS NIH HHS UL1 TR001082NIAID NIH HHS R01 AI067380NIAID NIH HHS T32 AI052066
6 · The paper itself

Abstract

Background.  West Nile virus (WNV) infection in humans can result in severe, acute encephalitis typically involving subcortical gray matter brain regions. West Nile virus replication within specific human brain regions from a human case of acute encephalitis has not been studied. Methods.  We describe a fatal case of WNV encephalitis in which we obtained tissue from specific brain regions at autopsy to evaluate viral-host interactions using next-generation sequencing and immunohistochemistry analysis. Results.  We found that WNV populations in the injured subcortical brain regions exhibited increased amino acid variation and increased expression of specific interferon genes compared with cortical tissues despite similar viral burden. Conclusions.  These observational, patient-based data suggest that neuronal injury and the strength of viral selection pressure may be associated with the level of the innate immune responses. Further studies in human and animal models evaluating the role of innate immune responses on injury patterns and viral selection pressure are needed.

Indexed as

apoptosisencephalitisinterferon-stimulated genesnext-generation sequencingWest Nile virus

Identifiers

PMID26730392
PMCPMC4697916

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.