Evidence map›Paper›PMID 26729372›Full record

ArticleNature communications2016

The histone demethylase JMJD2A/KDM4A links ribosomal RNA transcription to nutrients and growth factors availability.

Kader Salifou, Swagat Ray, Laure Verrier, Marion Aguirrebengoa, Didier Trouche, Konstantin I Panov, Marie Vandromme

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 45 citations in OpenAlex.

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  13. KDM4 Demethylases: Structure, Function, and Inhibitors.Advances in experimental medicine and biology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Kader SalifouCentre for Integrative Biology, Université de Toulouse, UT3 Toulouse, France.
Swagat RaySchool of Biological Sciences, Queen's University Belfast, Belfast BT9 7BL, UK.
Laure VerrierCentre for Integrative Biology, Université de Toulouse, UT3 Toulouse, France.
Marion AguirrebengoaCentre for Integrative Biology, Université de Toulouse, UT3 Toulouse, France.
Didier TroucheCentre for Integrative Biology, Université de Toulouse, UT3 Toulouse, France.
Konstantin I PanovSchool of Biological Sciences, Queen's University Belfast, Belfast BT9 7BL, UK.
Marie VandrommeCentre for Integrative Biology, Université de Toulouse, UT3 Toulouse, France.
Centre National de la Recherche Scientifique · FRQueen's University Belfast · GBUniversité de Toulouse · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The interplay between methylation and demethylation of histone lysine residues is an essential component of gene expression regulation and there is considerable interest in elucidating the roles of proteins involved. Here we report that histone demethylase KDM4A/JMJD2A, which is involved in the regulation of cell proliferation and is overexpressed in some cancers, interacts with RNA Polymerase I, associates with active ribosomal RNA genes and is required for serum-induced activation of rDNA transcription. We propose that KDM4A controls the initial stages of transition from 'poised', non-transcribed rDNA chromatin into its active form. We show that PI3K, a major signalling transducer central for cell proliferation and survival, controls cellular localization of KDM4A and consequently its association with ribosomal DNA through the SGK1 downstream kinase. We propose that the interplay between PI3K/SGK1 signalling cascade and KDM4A constitutes a mechanism by which cells adapt ribosome biogenesis level to the availability of growth factors and nutrients.

Indexed as

Cell Line, TumorDNA, RibosomalGene Expression RegulationHistonesHumansJumonji Domain-Containing Histone DemethylasesMitogen-Activated Protein Kinase KinasesProtein TransportRNA, RibosomalTOR Serine-Threonine KinasesTranscription, GeneticDNA, RibosomalHistonesJumonji Domain-Containing Histone DemethylasesKDM4A protein, humanMitogen-Activated Protein Kinase KinasesMTOR protein, humanRNA, RibosomalTOR Serine-Threonine Kinases

Identifiers

PMID26729372
PMCPMC5157185
OpenAlexW2230636989

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.