Evidence map›Paper›PMID 26728193›Full record

ArticleJournal of bacteriology2016

Processing of Nonconjugative Resistance Plasmids by Conjugation Nicking Enzyme of Staphylococci.

Rebecca M Pollet, James D Ingle, Jeff P Hymes, Thomas C Eakes, Karina Yui Eto, Stephen M Kwong, Joshua P Ramsay, Neville Firth, Matthew R Redinbo

Abstract read
In one paragraph

Article in Journal of bacteriology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. The Plasmidomic Landscape of Clinical Methicillin-ResistantAntibiotics (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Article
  7. Frontiers in microbiology · 2019
    Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Rebecca M PolletDepartment of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, North Carolina, USA.
James D IngleDepartment of Chemistry, University of North Carolina, Chapel Hill, North Carolina, USA.
Jeff P HymesDepartment of Chemistry, University of North Carolina, Chapel Hill, North Carolina, USA.
Thomas C EakesDepartment of Chemistry, University of North Carolina, Chapel Hill, North Carolina, USA.
Karina Yui EtoCHIRI Biosciences Precinct, School of Biomedical Sciences, Curtin University, Bentley, WA, Australia.
Stephen M KwongSchool of Biological Sciences, University of Sydney, Sydney, NSW, Australia.
Joshua P RamsayCHIRI Biosciences Precinct, School of Biomedical Sciences, Curtin University, Bentley, WA, Australia.
Neville FirthSchool of Biological Sciences, University of Sydney, Sydney, NSW, Australia.
Matthew R RedinboDepartment of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, North Carolina, USA Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina, USA redinbo@unc.edu.

Funding

Structure and Inhibition of the Conjugative DNA Relaxase-HelicaseR01AI078924 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI REDINBO, MATTHEW R · 2008 to 2012
$1.9M
NIAID NIH HHS AI78924NIAID NIH HHS R01 AI078924
6 · The paper itself

Abstract

unlabelledAntimicrobial resistance in Staphylococcus aureus presents an increasing threat to human health. This resistance is often encoded on mobile plasmids, such as pSK41; however, the mechanism of transfer of these plasmids is not well understood. In this study, we first examine key protein-DNA interactions formed by the relaxase enzyme, NES, which initiates and terminates the transfer of the multidrug resistance plasmid pSK41. Two loops on the NES protein, hairpin loops 1 and 2, form extensive contacts with the DNA hairpin formed at the oriT region of pSK41, and here we establish that these contacts are essential for proper DNA cleavage and religation by the full 665-residue NES protein in vitro. Second, pSK156 and pCA347 are nonconjugative Staphylococcus aureus plasmids that contain sequences similar to the oriT region of pSK41 but differ in the sequence predicted to form a DNA hairpin. We show that pSK41-encoded NES is able to bind, cleave, and religate the oriT sequences of these nonconjugative plasmids in vitro. Although pSK41 could mobilize a coresident plasmid harboring its cognate oriT, it was unable to mobilize plasmids containing the pSK156 and pCA347 variant oriT mimics, suggesting that an accessory protein like that previously shown to confer specificity in the pWBG749 system may also be involved in transmission of plasmids containing a pSK41-like oriT. These data indicate that the conjugative relaxase in trans mechanism recently described for the pWBG749 family of plasmids also applies to the pSK41 family of plasmids, further heightening the potential significance of this mechanism in the horizontal transfer of staphylococcal plasmids. IMPORTANCE: Understanding the mechanism of antimicrobial resistance transfer in bacteria such as Staphylococcus aureus is an important step toward potentially slowing the spread of antimicrobial-resistant infections. This work establishes protein-DNA interactions essential for the transfer of the Staphylococcus aureus multiresistance plasmid pSK41 by its relaxase, NES. This enzyme also processed variant oriT-like sequences found on numerous plasmids previously considered nontransmissible, suggesting that in conjunction with an uncharacterized accessory protein, these plasmids may be transferred horizontally via a relaxase in trans mechanism. These findings have important implications for our understanding of staphylococcal resistance plasmid evolution.

Indexed as

Conjugation, GeneticDNA Breaks, Single-StrandedGene Transfer, HorizontalPlasmidsBacterial ProteinsDNA, BacterialEndonucleasesNucleic Acid ConformationProtein BindingReplication OriginStaphylococcus aureusBacterial ProteinsDNA, BacterialEndonucleasesnes protein, Staphylococcus aureus

Identifiers

PMID26728193
PMCPMC4772599

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.