Evidence map›Paper›PMID 26727990›Full record

ArticleAIDS research and human retroviruses2016

Short Communication: The Broad-Spectrum Histone Deacetylase Inhibitors Vorinostat and Panobinostat Activate Latent HIV in CD4(+) T Cells In Part Through Phosphorylation of the T-Loop of the CDK9 Subunit of P-TEFb.

Md Saha Jamaluddin, Pei-Wen Hu, Yih Jan, Edward B Siwak, Andrew P Rice

Open access · bronzeAbstract read
In one paragraph

Article in AIDS research and human retroviruses, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Review
  3. Latency Reversing Agents: Kick and Kill of HTLV-1?International journal of molecular sciences · 2021
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Proteomic Profiling of a Primary CD4AIDS research and human retroviruses · 2018
    Article
  12. Article
  13. Review
  14. Review
  15. Strategies to target non-T-cell HIV reservoirs.Current opinion in HIV and AIDS · 2016
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Md Saha JamaluddinDepartment of Molecular Virology and Microbiology, Baylor College of Medicine , Houston, Texas.
Pei-Wen HuDepartment of Molecular Virology and Microbiology, Baylor College of Medicine , Houston, Texas.
Yih JanDepartment of Molecular Virology and Microbiology, Baylor College of Medicine , Houston, Texas.
Edward B SiwakDepartment of Molecular Virology and Microbiology, Baylor College of Medicine , Houston, Texas.
Andrew P RiceDepartment of Molecular Virology and Microbiology, Baylor College of Medicine , Houston, Texas.
Baylor College of Medicine · US

Funding

Role of P-TEFB in HIV latencyR21AI116173 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 2014 to 2015
$435k
Mechanisms of Reactivation of Latent HIV by HDAC InhibitorsR21AI110263 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 2014 to 2015
$430k
NIAID NIH HHS AI110263NIAID NIH HHS AI116173NIAID NIH HHS P30AI1036211NIAID NIH HHS R21 AI116173
6 · The paper itself

Abstract

Cessation of highly active antiretroviral therapy (HAART) in HIV-infected individual leads to a rebound of viral replication due to reactivation of a viral reservoir composed largely of latently infected memory CD4(+) T cells. Efforts to deplete this reservoir have focused on reactivation of transcriptionally silent latent proviruses. HIV provirus transcription depends critically on the positive transcription elongation factor b (P-TEFb), whose core components are cyclin-dependent kinase 9 (CDK9) and cyclin T1. In resting CD4(+) cells, the functional levels of P-TEFb are extremely low. Cellular activation upregulates cyclin T1 protein levels and CDK9 T-loop (T186) phosphorylation. The broad-spectrum histone deacetylase inhibitors (HDACis) vorinostat and panobinostat have been shown to reactivate latent virus in vivo in HAART-treated individuals. In this study, we have found that vorinostat and panobinostat activate P-TEFb in resting primary CD4(+) T cells through induction of CDK9 T-loop phosphorylation. In contrast, tacedinaline and romidepsin, HDAC 1 and 2 inhibitors, were unable to activate CDK9 T-loop phosphorylation. We used a CCL19 primary CD4(+) T-cell model HIV latency to assess the correlation between induction of CDK9 T-loop phosphorylation and reactivation of latent HIV virus by HDACis. Vorinostat and panobinostat treatment of cells harboring latent HIV increased CDK9 T-loop phosphorylation and reactivation of latent virus, whereas tacedinaline and romidepsin failed to induce T-loop phosphorylation or reactivate latent virus. We conclude that the ability of vorinostat and panobinostat to induce latent HIV is, in part, likely due to the ability of the broad-spectrum HDACis to upregulate P-TEFb through increased CDK9 T-loop phosphorylation.

Indexed as

Antiretroviral Therapy, Highly ActiveBenzamidesCD4-Positive T-LymphocytesCells, CulturedCyclin-Dependent Kinase 9Cyclin TDepsipeptidesEnzyme ActivationGene Expression Regulation, ViralHistone Deacetylase InhibitorsHIV-1HIV InfectionsHumansHydroxamic AcidsIndolesPanobinostatBenzamidesCCNT1 protein, humanCDK9 protein, humanCyclin-Dependent Kinase 9Cyclin TDepsipeptidesHistone Deacetylase InhibitorsHydroxamic AcidsIndolesPanobinostatPhenylenediaminesPositive Transcriptional Elongation Factor BromidepsintacedinalineVorinostat

Identifiers

PMID26727990
PMCPMC4761808
OpenAlexW2228293684

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.