Evidence map›Paper›PMID 26727667›Full record

ArticleRNA biology2016

The polyadenylation complex of Trypanosoma brucei: Characterization of the functional poly(A) polymerase.

Henrik Koch, Monika Raabe, Henning Urlaub, Albrecht Bindereif, Christian Preußer

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Life stage-specific poly(A) site selection regulated byProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. TheRNA (New York, N.Y.) · 2022
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Henrik Kocha Institute of Biochemistry, Justus Liebig University of Giessen , D-35392 Giessen , Germany.
Monika Raabeb Bioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry , D-37077 Göttingen , Germany.
Henning Urlaubb Bioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry , D-37077 Göttingen , Germany.
Albrecht Bindereifa Institute of Biochemistry, Justus Liebig University of Giessen , D-35392 Giessen , Germany.
Christian Preußera Institute of Biochemistry, Justus Liebig University of Giessen , D-35392 Giessen , Germany.
University of Giessen · DEMax Planck Institute for Biophysical Chemistry · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The generation of mature mRNA in the protozoan parasite Trypanosoma brucei requires coupled polyadenylation and trans splicing. In contrast to other eukaryotes, we still know very little on components, mechanisms, and dynamics of the 3' end-processing machinery in trypanosomes. To characterize the catalytic core of the polyadenylation complex in T. brucei, we first identified the poly(A) polymerase [Tb927.7.3780] as the major functional, nuclear-localized enzyme in trypanosomes. In contrast, another poly(A) polymerase, encoded by an intron-containing gene [Tb927.3.3160], localizes mainly in the cytoplasm and appears not to be functional in general 3' end processing of mRNAs. Based on tandem-affinity purification with tagged CPSF160 and mass spectrometry, we identified ten associated components of the trypanosome polyadenylation complex, including homologues to all four CPSF subunits, Fip1, CstF50/64, and Symplekin, as well as two hypothetical proteins. RNAi-mediated knockdown revealed that most of these factors are essential for growth and required for both in vivo polyadenylation and trans splicing, arguing for a general coupling of these two mRNA-processing reactions.

Indexed as

DNA-Directed RNA PolymerasesIntronsPoly APolyadenylationRNA, MessengerTrans-SplicingTrypanosoma brucei bruceiDNA-Directed RNA PolymerasesPoly ARNA, MessengerCPSFmRNA processingpolyadenylationpoly(A) polymerasetrans splicingTrypanosoma brucei

Identifiers

PMID26727667
PMCPMC4829303
OpenAlexW2281811566

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.