Evidence map›Paper›PMID 26727373›Full record

ArticlePLoS pathogens2016

A Highly Conserved Bacterial D-Serine Uptake System Links Host Metabolism and Virulence.

James P R Connolly, Mads Gabrielsen, Robert J Goldstone, Rhys Grinter, Dai Wang, Richard J Cogdell, Daniel Walker, David G E Smith, Andrew J Roe

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 63 citations in OpenAlex.

  1. Catabolism of serine enantiomers represses enterohemorrhagicProceedings of the National Academy of Sciences of the United States of America · 2026
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  3. Microbiology (Reading, England) · 2025
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  6. Distinct ecological fitness factors coordinated by a conservedProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Article
  8. Control of resistance against bacteriophage killing by a metabolic regulator in meningitis-associatedProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Microbial Musings - October 2021.Microbiology (Reading, England) · 2021
    Article
  16. Review
  17. Genomic plasticity of pathogenicProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

James P R ConnollyInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, United Kingdom.
Mads GabrielsenCancer Research UK Beatson Institute, Glasgow, United Kingdom.
Robert J GoldstoneSchool of Life Sciences, Heriot-Watt University, Edinburgh, United Kingdom.
Rhys GrinterDepartment of Microbiology, Monash University, Melbourne, Victoria, Australia.
Dai WangState Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, School of Public Health, Xiamen University, Xiamen, Fujian, People's Republic of China.
Richard J CogdellInstitute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, United Kingdom.
Daniel WalkerInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, United Kingdom.
David G E SmithSchool of Life Sciences, Heriot-Watt University, Edinburgh, United Kingdom.
Andrew J RoeInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, United Kingdom.
University of Glasgow · GBHeriot-Watt University · GBCancer Research UK Scotland Institute · GBMonash University · AUXiamen University · CN

Funding

Biotechnology and Biological Sciences Research Council BB/1017283/1Medical Research Council G0900740Medical Research Council MR/J50032X/1Medical Research Council MR/K001744/1
6 · The paper itself

Abstract

The ability of any organism to sense and respond to challenges presented in the environment is critically important for promoting or restricting colonization of specific sites. Recent work has demonstrated that the host metabolite D-serine has the ability to markedly influence the outcome of infection by repressing the type III secretion system of enterohaemorrhagic Escherichia coli (EHEC) in a concentration-dependent manner. However, exactly how EHEC monitors environmental D-serine is not understood. In this work, we have identified two highly conserved members of the E. coli core genome, encoding an inner membrane transporter and a transcriptional regulator, which collectively help to "sense" levels of D-serine by regulating its uptake from the environment and in turn influencing global gene expression. Both proteins are required for full expression of the type III secretion system and diversely regulated prophage-encoded effector proteins demonstrating an important infection-relevant adaptation of the core genome. We propose that this system acts as a key safety net, sampling the environment for this metabolite, thereby promoting colonization of EHEC to favorable sites within the host.

Indexed as

Amino Acid SequenceBase SequenceCell LineElectrophoretic Mobility Shift AssayEnterohemorrhagic Escherichia coliEscherichia coli InfectionsEscherichia coli ProteinsGene Expression Regulation, BacterialHost-Pathogen InteractionsHumansImmunoblottingMicroscopy, FluorescenceMolecular Sequence DataReal-Time Polymerase Chain ReactionSerineType III Secretion SystemsEscherichia coli ProteinsSerineType III Secretion Systems

Identifiers

PMID26727373
PMCPMC4699771
OpenAlexW2200270179

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.