Evidence map›Paper›PMID 26727288›Full record

ArticleAutophagy2016

Control of lysosomal biogenesis and Notch-dependent tissue patterning by components of the TFEB-V-ATPase axis in Drosophila melanogaster.

Emiliana Tognon, Francis Kobia, Ilaria Busi, Arianna Fumagalli, Federico De Masi, Thomas Vaccari

Open access · hybridAbstract read
In one paragraph

Article in Autophagy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 47 citations in OpenAlex.

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  18. MiT/TFE Family of Transcription Factors: An Evolutionary Perspective.Frontiers in cell and developmental biology · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Emiliana Tognona IFOM - FIRC Institute of Molecular Oncology , Milan , Italy.
Francis Kobiaa IFOM - FIRC Institute of Molecular Oncology , Milan , Italy.
Ilaria Busia IFOM - FIRC Institute of Molecular Oncology , Milan , Italy.
Arianna Fumagallia IFOM - FIRC Institute of Molecular Oncology , Milan , Italy.
Federico De Masib Center for Biological Sequence Analysis, Institute for Systems Biology, Technical University of Denmark , Lyngby , Denmark.
Thomas Vaccaria IFOM - FIRC Institute of Molecular Oncology , Milan , Italy.
FIRC Institute of Molecular Oncology · ITTechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In vertebrates, TFEB (transcription factor EB) and MITF (microphthalmia-associated transcription factor) family of basic Helix-Loop-Helix (bHLH) transcription factors regulates both lysosomal function and organ development. However, it is not clear whether these 2 processes are interconnected. Here, we show that Mitf, the single TFEB and MITF ortholog in Drosophila, controls expression of vacuolar-type H(+)-ATPase pump (V-ATPase) subunits. Remarkably, we also find that expression of Vha16-1 and Vha13, encoding 2 key components of V-ATPase, is patterned in the wing imaginal disc. In particular, Vha16-1 expression follows differentiation of proneural regions of the disc. These regions, which will form sensory organs in the adult, appear to possess a distinctive endolysosomal compartment and Notch (N) localization. Modulation of Mitf activity in the disc in vivo alters endolysosomal function and disrupts proneural patterning. Similar to our findings in Drosophila, in human breast epithelial cells we observe that impairment of the Vha16-1 human ortholog ATP6V0C changes the size and function of the endolysosomal compartment and that depletion of TFEB reduces ligand-independent N signaling activity. Our data suggest that lysosomal-associated functions regulated by the TFEB-V-ATPase axis might play a conserved role in shaping cell fate.

Indexed as

Body PatterningSignal TransductionAnimalsCell DifferentiationDrosophila melanogasterDrosophila ProteinsEpithelial CellsHumansImaginal DiscsLysosomesModels, BiologicalNeuronsReceptors, NotchSequence Homology, Amino AcidTranscription, GeneticVacuolar Proton-Translocating ATPasesDrosophila ProteinsN protein, DrosophilaReceptors, NotchVacuolar Proton-Translocating ATPasesautophagylysosomemitfNotch signalingpatterningSOPTFEBV-ATPase

Identifiers

PMID26727288
PMCPMC4836007
OpenAlexW2227383225

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.