Evidence map›Paper›PMID 26726866›Full record

ArticleLangmuir : the ACS journal of surfaces and colloids2016

Nonfouling NTA-PEG-Based TEM Grid Coatings for Selective Capture of Histidine-Tagged Protein Targets from Cell Lysates.

Christopher J Benjamin, Kyle J Wright, Seok-Hee Hyun, Kyle Krynski, Guimei Yu, Ruchika Bajaj, Fei Guo, Cynthia V Stauffacher, Wen Jiang, David H Thompson

Abstract read
In one paragraph

Article in Langmuir : the ACS journal of surfaces and colloids, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
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  7. Nanodiscs: A toolkit for membrane protein science.Protein science : a publication of the Protein Society · 2021
    Review
  8. General and robust covalently linked graphene oxide affinity grids for high-resolution cryo-EM.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Biological Applications at the Cutting Edge of Cryo-Electron Microscopy.Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada · 2018
    Review
  10. Review
  11. Review
  12. Article
  13. Atomic cryo-EM structures of viruses.Current opinion in structural biology · 2017
    Review
  14. Cryo-EM: beyond the microscope.Current opinion in structural biology · 2017
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Christopher J BenjaminDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
Kyle J WrightDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
Seok-Hee HyunDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
Kyle KrynskiDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
Guimei YuDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
Ruchika BajajDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
Fei GuoDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
Cynthia V StauffacherDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
Wen JiangDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.
David H ThompsonDepartment of Chemistry and ‡Department of Biological Sciences, Purdue University , West Lafayette, Indiana 47907, United States.

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI John Tesmer · 1985 to 2026
$43.4M
Modified Grids for Biological Sample Capture to Accelerate CryoEM Structure EluciR41GM098017 · NIGMS · PANDION LABORATORIES, LLC · PI HATHAWAY, NANCY L, THOMPSON, DAVID H · 2011 to 2011
$100k
NCI NIH HHS P30 CA023168NIGMS NIH HHS R41 GM098017NIGMS NIH HHS R41GM098017
6 · The paper itself

Abstract

We report the preparation and performance of TEM grids bearing stabilized nonfouling lipid monolayer coatings. These films contain NTA capture ligands of controllable areal density at the distal end of a flexible poly(ethylene glycol) 2000 (PEG2000) spacer to avoid preferred orientation of surface-bound histidine-tagged (His-tag) protein targets. Langmuir-Schaefer deposition at 30 mN/m of mixed monolayers containing two novel synthetic lipids-1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[(5-amido-1-carboxypentyl)iminodiacetic acid]polyethylene glycolamide 2000) (NTA-PEG2000-DSPE) and 1,2-(tricosa-10',12'-diynoyl)-sn-glycero-3-phosphoethanolamine-N-(methoxypolyethylene glycolamide 350) (mPEG350-DTPE)-in 1:99 and 5:95 molar ratios prior to treatment with a 5 min, 254 nm light exposure was used for grid fabrication. These conditions were designed to limit nonspecific protein adsorption onto the stabilized lipid coating by favoring the formation of a mPEG350 brush layer below a flexible, mushroom conformation of NTA-PEG2000 at low surface density to enable specific immobilization and random orientation of the protein target on the EM grid. These grids were then used to capture His6-T7 bacteriophage and RplL from cell lysates, as well as purified His8-green fluorescent protein (GFP) and nanodisc solubilized maltose transporter, His6-MalFGK2. Our findings indicate that TEM grid supported, polymerized NTA lipid monolayers are capable of capturing His-tag protein targets in a manner that controls their areal densities, while efficiently blocking nonspecific adsorption and limiting film degradation, even upon prolonged detergent exposure.

Indexed as

AdsorptionATP-Binding Cassette TransportersBacteriophage T7Cell ExtractsCryoelectron MicroscopyEscherichia coliEscherichia coli ProteinsGene ExpressionGreen Fluorescent ProteinsHistidineMicroscopy, Electron, TransmissionNitrilotriacetic AcidOligopeptidesPhosphatidylethanolaminesPolyethylene GlycolsRecombinant Fusion Proteins1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-methoxy-poly(ethylene glycol 2000)ATP-Binding Cassette TransportersCell ExtractsEscherichia coli ProteinsGreen Fluorescent ProteinsHis-His-His-His-His-HisHistidinemaltose transport system, E coliMPEG350Nitrilotriacetic AcidOligopeptidesPhosphatidylethanolaminespolyethylene glycol 2000Polyethylene GlycolsRecombinant Fusion Proteinsribosomal protein L7-L12Ribosomal Proteins

Identifiers

PMID26726866
PMCPMC5310270

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.