Evidence map›Paper›PMID 26723542›Full record

ArticleNeurochemistry international2016

(13)C metabolic flux analysis in neurons utilizing a model that accounts for hexose phosphate recycling within the pentose phosphate pathway.

Hoda M Gebril, Bharathi Avula, Yan-Hong Wang, Ikhlas A Khan, Mika B Jekabsons

Abstract read
In one paragraph

Article in Neurochemistry international, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
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  4. Article
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  6. Frontiers in molecular neuroscience · 2022
    Review
  7. Review
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  9. Review
  10. Updates to aNeurochemistry international · 2017
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hoda M GebrilDepartment of Biology, Shoemaker Hall, University of Mississippi, University, MS 38677, USA. Electronic address: hmgebril@go.olemiss.edu.
Bharathi AvulaNational Center for Natural Products Research, School of Pharmacy, University of Mississippi, University, MS 38677, USA. Electronic address: bavula@olemiss.edu.
Yan-Hong WangNational Center for Natural Products Research, School of Pharmacy, University of Mississippi, University, MS 38677, USA. Electronic address: wangyh@olemiss.edu.
Ikhlas A KhanDepartment of Biomedical Sciences and National Center for Natural Products Research, School of Pharmacy, University of Mississippi, University, MS 38677, USA. Electronic address: ikhan@olemiss.edu.
Mika B JekabsonsDepartment of Biology, Shoemaker Hall, University of Mississippi, University, MS 38677, USA. Electronic address: jekabson@olemiss.edu.
University of Mississippi · US

Funding

Regulation of the pro-apoptotic protein Bax during neuronal apoptosisR15NS060107 · NINDS · UNIVERSITY OF MISSISSIPPI · PI JEKABSONS, MIKA · 2008 to 2008
$212k
NINDS NIH HHS R15 NS060107NINDS NIH HHS R15NS060107
6 · The paper itself

Abstract

Glycolysis, mitochondrial substrate oxidation, and the pentose phosphate pathway (PPP) are critical for neuronal bioenergetics and oxidation-reduction homeostasis, but quantitating their fluxes remains challenging, especially when processes such as hexose phosphate (i.e., glucose/fructose-6-phosphate) recycling in the PPP are considered. A hexose phosphate recycling model was developed which exploited the rates of glucose consumption, lactate production, and mitochondrial respiration to infer fluxes through the major glucose consuming pathways of adherent cerebellar granule neurons by replicating [(13)C]lactate labeling from metabolism of [1,2-(13)C2]glucose. Flux calculations were predicated on a steady-state system with reactions having known stoichiometries and carbon atom transitions. Non-oxidative PPP activity and consequent hexose phosphate recycling, as well as pyruvate production by cytoplasmic malic enzyme, were optimized by the model and found to account for 28 ± 2% and 7.7 ± 0.2% of hexose phosphate and pyruvate labeling, respectively. From the resulting fluxes, 52 ± 6% of glucose was metabolized by glycolysis, compared to 19 ± 2% by the combined oxidative/non-oxidative pentose cycle that allows for hexose phosphate recycling, and 29 ± 8% by the combined oxidative PPP/de novo nucleotide synthesis reactions. By extension, 62 ± 6% of glucose was converted to pyruvate, the metabolism of which resulted in 16 ± 1% of glucose oxidized by mitochondria and 46 ± 6% exported as lactate. The results indicate a surprisingly high proportion of glucose utilized by the pentose cycle and the reactions synthesizing nucleotides, and exported as lactate. While the in vitro conditions to which the neurons were exposed (high glucose, no lactate or other exogenous substrates) limit extrapolating these results to the in vivo state, the approach provides a means of assessing a number of metabolic fluxes within the context of hexose phosphate recycling in the PPP from a minimal set of measurements.

Indexed as

Models, BiologicalPentose Phosphate PathwayAnimalsCarbon IsotopesCerebellumChromatography, LiquidCytoplasmic GranulesHexosesMonte Carlo MethodNeuronsRatsRats, WistarTandem Mass SpectrometryCarbon IsotopesHexosesBioenergeticsGlycolysisMalic enzymeMitochondriaOxidative stressPentose phosphate pathway

Identifiers

PMID26723542
PMCPMC4762749
OpenAlexW2207463256

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.