Evidence map›Paper›PMID 26722555›Full record

ArticleInternational journal of clinical and experimental pathology2015

Association of ATP-binding cassette transporter A1 gene polymorphisms with plasma lipid variability and coronary heart disease risk.

Yuping Lu, Yawen Liu, Yong Li, Huiping Zhang, Mingxi Yu, Joseph Sam Kanu, Yichun Qiao, Yuan Tang, Qing Zhen, Yi Cheng

Open access · greenAbstract read
In one paragraph

Article in International journal of clinical and experimental pathology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Role ofJournal of personalized medicine · 2022
    Review
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  6. Associations of Genetic Variations inInternational journal of environmental research and public health · 2019
    Article
  7. Article
  8. Review
  9. A preliminary study of the association between theMolecular biology research communications · 2018
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Yuping LuDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Yawen LiuDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Yong LiDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Huiping ZhangDepartment of Psychiatry, Yale University School of Medicine, VA Medical Center/116A2 950 Campbell Avenue, West Haven, CT 06516, USA.
Mingxi YuDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Joseph Sam KanuDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Yichun QiaoDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Yuan TangDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Qing ZhenDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University Changchun 130021, China.
Yi ChengThe Cardiovascular Center, The First Hospital of Jilin University Changchun 130021, China.
Jilin University · CNYale University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveOur study aimed to investigate the association of ABCA1 polymorphisms with plasma lipid variability and CHD risk in the Chinese Han population.

methods754 CHD patients and 760 controls were included in this case-control study. Three SNPs (rs363717, rs4149339, and rs4149338) in ABCA1 3'UTR and one nonsynonymous SNP (rs2230808) in ABCA1 exon 35 were selected and genotyped. The analysis of genetic data was performed using the SNPstats program and the SPSS17.0 software.

resultsSignificant associations were observed between SNP rs363717 and CHD risk under different genetic models before or after Bonferroni corrections (codominant model: OR = 0.70, P = 0.003 for AG vs. AA; dominant model: OR = 0.71, P = 0.003 for GG + AG vs. AA). The nonsynonymous SNP rs2230808 was associated with higher total cholesterol levels (P = 0.047). The GCC haplotype (consisting of alleles of SNPs rs363717, rs4149339, and rs4149338) was associated with a decreased risk of CHD (OR = 0.8, P = 0.027). Three ABCA1 SNPs interacted with high triglyceride levels to increase CHD risk (P values of interactions were 0.010 for rs363717, 0.010 for rs4149339, and 0.020 for rs4149338, respectively).

conclusionsOur results suggest that ABCA1 polymorphisms influence plasma lipid variability and CHD risk. ABCA1 polymorphisms could also modify the effects of plasma lipids on CHD risk.

Indexed as

Polymorphism, Single NucleotideAdultAgedAsian PeopleATP Binding Cassette Transporter 1Case-Control StudiesCoronary DiseaseFemaleGenetic Predisposition to DiseaseGenotypeHumansLipidsMaleMiddle AgedOligonucleotide Array Sequence AnalysisRiskABCA1 protein, humanATP Binding Cassette Transporter 1LipidsATP-binding cassette transporter A1 genecoronary heart diseaseplasma lipidssingle nucleotide polymorphism

Identifiers

PMID26722555
PMCPMC4680500
OpenAlexW2415767860

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.