Evidence map›Paper›PMID 26721503›Full record

ArticleJournal of experimental botany2016

The CA domain of the respiratory complex I is required for normal embryogenesis in Arabidopsis thaliana.

Juan Pablo Córdoba, Fernanda Marchetti, Débora Soto, María Victoria Martin, Gabriela Carolina Pagnussat, Eduardo Zabaleta

Abstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
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  4. Review
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  6. International journal of molecular sciences · 2022
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  7. Review
  8. Article
  9. Article
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  12. Article
  13. Conserved in situ arrangement of complex I and IIIProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Respiratory complex I and embryo development.Journal of experimental botany · 2016
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Juan Pablo CórdobaInstituto de Investigaciones Biológicas IIB-CONICET-UNMdP, Funes 3250 3er nivel 7600 Mar del Plata, Argentina Received 6 October 2015; Revised 24 November 2015; Accepted 10 December 2015.
Fernanda MarchettiInstituto de Investigaciones Biológicas IIB-CONICET-UNMdP, Funes 3250 3er nivel 7600 Mar del Plata, Argentina Received 6 October 2015; Revised 24 November 2015; Accepted 10 December 2015.
Débora SotoInstituto de Investigaciones Biológicas IIB-CONICET-UNMdP, Funes 3250 3er nivel 7600 Mar del Plata, Argentina Received 6 October 2015; Revised 24 November 2015; Accepted 10 December 2015.
María Victoria MartinInstituto de Investigaciones Biológicas IIB-CONICET-UNMdP, Funes 3250 3er nivel 7600 Mar del Plata, Argentina Received 6 October 2015; Revised 24 November 2015; Accepted 10 December 2015.
Gabriela Carolina PagnussatInstituto de Investigaciones Biológicas IIB-CONICET-UNMdP, Funes 3250 3er nivel 7600 Mar del Plata, Argentina Received 6 October 2015; Revised 24 November 2015; Accepted 10 December 2015.
Eduardo ZabaletaInstituto de Investigaciones Biológicas IIB-CONICET-UNMdP, Funes 3250 3er nivel 7600 Mar del Plata, Argentina Received 6 October 2015; Revised 24 November 2015; Accepted 10 December 2015 ezabalet@mdp.edu.ar.

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

The NADH-ubiquinone oxidoreductase [complex I (CI), EC 1.6.5.3] of the mitochondrial respiratory chain is the principal entry point of electrons, and vital in maintaining metabolism and the redox balance. In a variety of eukaryotic organisms, except animal and fungi (Opisthokonta), it contains an extra domain composed of putative gamma carbonic anhydrases subunits, named the CA domain, which was proposed to be essential for complex I assembly. There are two kinds of carbonic anhydrase subunits: CAs (of which there are three) and carbonic anhydrase-like proteins (CALs) (of which there are two). In plants, the CA domain has been linked to photorespiration. In this work, we report that Arabidopsis mutant plants affected in two specific CA subunits show a lethal phenotype. Double homozygous knockouts ca1ca2 embryos show a significant developmental delay compared to the non-homozygous embryos, which show a wild-type (WT) phenotype in the same silique. Mutant embryos show impaired mitochondrial membrane potential and mitochondrial reactive oxygen species (ROS) accumulation. The characteristic embryo greening does not take place and fewer but larger oil bodies are present. Although seeds look dark brown and wrinkled, they are able to germinate 12 d later than WT seeds. However, they die immediately, most likely due to oxidative stress.Since the CA domain is required for complex I biogenesis, it is predicted that in ca1ca2 mutants no complex I could be formed, triggering the lethal phenotype. The in vivo composition of a functional CA domain is proposed.

Indexed as

ArabidopsisElectron Transport Complex IGametogenesis, PlantGene Expression Regulation, PlantGene Knockout TechniquesGene SilencingGenes, PlantHeterozygoteHomozygoteHydrogen PeroxideLipid DropletsMembrane Potential, MitochondrialMitochondriaMutationPromoter Regions, GeneticProtein BindingElectron Transport Complex IHydrogen PeroxideReactive Oxygen SpeciesSuperoxidesEmbryogenesisgamma carbonic anhydrasemembrane potencialreactive oxygen speciesrespirationrespiratory complex I.

Identifiers

PMID26721503
PMCPMC5854192

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.