Evidence map›Paper›PMID 26719098›Full record

ArticleLeukemia2016

Recurrent activating mutations of CD28 in peripheral T-cell lymphomas.

J Rohr, S Guo, J Huo, A Bouska, C Lachel, Y Li, P D Simone, W Zhang, Q Gong, C Wang and 18 more

Abstract read
In one paragraph

Article in Leukemia, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 126 citations in OpenAlex.

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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 9 institutions in 6 countries.

J RohrDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
S GuoDepartment of Pathology, Xi Jing Hospital, Fourth Military Medical University, Xi'an, Shaan Xi Province, China.
J HuoRadcliffe Department of Medicine, University of Oxford, Oxford, UK.
A BouskaDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
C LachelDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
Y LiDepartment of Pathology, City of Hope National Medical Center, Duarte, CA, USA.
P D SimoneInternal Medicine Residency Program, Florida Atlantic University College of Medicine, Boca Raton, FL, USA.
W ZhangDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
Q GongDepartment of Pathology, City of Hope National Medical Center, Duarte, CA, USA.
C WangDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
A CannonDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
T HeavicanDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
A MottokDepartment for Lymphoid Cancer Research, Centre for Lymphoid Cancer, BC Cancer Agency, Vancouver, BC, Canada.
S HungDepartment for Lymphoid Cancer Research, Centre for Lymphoid Cancer, BC Cancer Agency, Vancouver, BC, Canada.
A RosenwaldInstitute of Pathology and Comprehensive Cancer Center Mainfranken (CCC MF), University of Wuerzburg, Wuerzburg, Germany.
R GascoyneDepartment for Lymphoid Cancer Research, Centre for Lymphoid Cancer, BC Cancer Agency, Vancouver, BC, Canada.
K FuDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
T C GreinerDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
D D WeisenburgerDepartment of Pathology, City of Hope National Medical Center, Duarte, CA, USA.
J M VoseDepartment of Medicine, University of Nebraska Medical Center, Omaha, NE, USA.
L M StaudtNational Institutes of Health, Bethesda, MD, USA.
W XiaoDivision of Bioinformatics and Biostatistics, National Center for Toxicological Research, Food and Drug Administration, Washington, DC, USA.
G E O BorgstahlEppley Institute for Cancer Research and Allied Diseases, University of Nebraska Medical Center, Omaha, NE, USA.
S DavisRadcliffe Department of Medicine, University of Oxford, Oxford, UK.
C SteidlDepartment for Lymphoid Cancer Research, Centre for Lymphoid Cancer, BC Cancer Agency, Vancouver, BC, Canada.
T McKeithanDepartment of Pathology, City of Hope National Medical Center, Duarte, CA, USA.
J IqbalDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
W C ChanDepartment of Pathology, City of Hope National Medical Center, Duarte, CA, USA.
University of Nebraska Medical Center · USCity Of Hope National Medical Center · USBC Cancer Agency · CAUniversity of Oxford · GBAir Force Medical University · CNAtlantic University College · PRComprehensive Cancer Center Mainfranken · DENational Center for Toxicological Research · USNational Institutes of Health · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI XIWEI WU · 1985 to 2026
$86.3M
UNMC Structural Biology CoreP20GM103427 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PAUL L SORGEN · 2012 to 2026
$59.2M
UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Joann B. Sweasy · 1985 to 2026
$55.0M
ZINC FINGER-INSPIRED FLUORESCENT CHEMOSENSORSP20RR016469 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI EUDY, JAMES D · 2001 to 2011
$36.2M
Transplant for Lymphoma:Therapy-Related LeukemiaP50CA107399 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI KWAK, LARRY W · 2004 to 2022
$35.5M
Molecular diagnosis and outcome prediction in lymphomaZIABC011006 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI STAUDT, LOUIS · 2009 to 2025
$21.0M
TRANSGENIC EXPRESSION ANALYSIS OF MIRNA-144P20RR018788 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI NICHOLS, DAVID G · 2003 to 2011
$16.5M
The Molecular Biology of Neurosurgery SystemsP20GM103471 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SMITH, SHELLEY D · 2012 to 2013
$4.1M
Molecular Diagnosis and Prognosis in Aggressive LymphomaU01CA157581 · NCI · UNIVERSITY OF ARIZONA · PI RIMSZA, LISA · 2011 to 2015
$3.1M
UT M.D. Anderson Cancer Center Lymphoma SPOREP50CA136411 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI YOUNES, ANAS · 2009 to 2011
$1.5M
UNMC SIG Supporting Next-generation DNA Sequencing TechnologyS10RR027754 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI EUDY, JAMES · 2010 to 2010
$500k
NCI NIH HHS P30 CA033572NCI NIH HHS P30 CA036727NCI NIH HHS P50 CA107399NCI NIH HHS P50 CA136411NCI NIH HHS U01 CA157581NCRR NIH HHS P20 RR016469NCRR NIH HHS P20 RR018788NCRR NIH HHS S10 RR027754NIGMS NIH HHS P20 GM103427NIGMS NIH HHS P20 GM103471
6 · The paper itself

Abstract

Peripheral T-cell lymphomas (PTCLs) comprise a heterogeneous group of mature T-cell neoplasms with a poor prognosis. Recently, mutations in TET2 and other epigenetic modifiers as well as RHOA have been identified in these diseases, particularly in angioimmunoblastic T-cell lymphoma (AITL). CD28 is the major co-stimulatory receptor in T cells which, upon binding ligand, induces sustained T-cell proliferation and cytokine production when combined with T-cell receptor stimulation. We have identified recurrent mutations in CD28 in PTCLs. Two residues-D124 and T195-were recurrently mutated in 11.3% of cases of AITL and in one case of PTCL, not otherwise specified (PTCL-NOS). Surface plasmon resonance analysis of mutations at these residues with predicted differential partner interactions showed increased affinity for ligand CD86 (residue D124) and increased affinity for intracellular adaptor proteins GRB2 and GADS/GRAP2 (residue T195). Molecular modeling studies on each of these mutations suggested how these mutants result in increased affinities. We found increased transcription of the CD28-responsive genes CD226 and TNFA in cells expressing the T195P mutant in response to CD3 and CD86 co-stimulation and increased downstream activation of NF-κB by both D124V and T195P mutants, suggesting a potential therapeutic target in CD28-mutated PTCLs.

Indexed as

MutationAntigens, Differentiation, T-LymphocyteB7-2 AntigenCD28 AntigensGene Expression Regulation, NeoplasticHumansLymphoma, T-Cell, PeripheralModels, MolecularNF-kappa BProtein BindingSurface Plasmon ResonanceT Lineage-Specific Activation Antigen 1Tumor Necrosis Factor-alphaAntigens, Differentiation, T-LymphocyteB7-2 AntigenCD28 AntigensNF-kappa BT Lineage-Specific Activation Antigen 1Tumor Necrosis Factor-alpha

Identifiers

PMID26719098
PMCPMC5688878
OpenAlexW2207837802

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.