ArticlePloS one2015
New Colors for Histology: Optimized Bivariate Color Maps Increase Perceptual Contrast in Histological Images.
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed.
- Information theory approaches to improve glioma diagnostic workflows in surgical neuropathology.Brain pathology (Zurich, Switzerland) · 2022Article
- Comparative Assessment of Digital Pathology Systems for Primary Diagnosis.Journal of pathology informatics · 2021Article
- Microscopy with ultraviolet surface excitation for rapid slide-free histology.Nature biomedical engineering · 2017Article
- Color-coded visualization of magnetic resonance imaging multiparametric maps.Scientific reports · 2017Article
- Stain Deconvolution Using Statistical Analysis of Multi-Resolution Stain Colour Representation.PloS one · 2017Article
- Multi-class texture analysis in colorectal cancer histology.Scientific reports · 2016Article
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundAccurate evaluation of immunostained histological images is required for reproducible research in many different areas and forms the basis of many clinical decisions. The quality and efficiency of histopathological evaluation is limited by the information content of a histological image, which is primarily encoded as perceivable contrast differences between objects in the image. However, the colors of chromogen and counterstain used for histological samples are not always optimally distinguishable, even under optimal conditions. METHODS AND
resultsIn this study, we present a method to extract the bivariate color map inherent in a given histological image and to retrospectively optimize this color map. We use a novel, unsupervised approach based on color deconvolution and principal component analysis to show that the commonly used blue and brown color hues in Hematoxylin-3,3'-Diaminobenzidine (DAB) images are poorly suited for human observers. We then demonstrate that it is possible to construct improved color maps according to objective criteria and that these color maps can be used to digitally re-stain histological images. VALIDATION: To validate whether this procedure improves distinguishability of objects and background in histological images, we re-stain phantom images and N = 596 large histological images of immunostained samples of human solid tumors. We show that perceptual contrast is improved by a factor of 2.56 in phantom images and up to a factor of 2.17 in sets of histological tumor images. CONTEXT: Thus, we provide an objective and reliable approach to measure object distinguishability in a given histological image and to maximize visual information available to a human observer. This method could easily be incorporated in digital pathology image viewing systems to improve accuracy and efficiency in research and diagnostics.
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