Evidence map›Paper›PMID 26716002›Full record

ArticleRoyal Society open science2015

Molecular identification of Oesophagostomum spp. from 'village' chimpanzees in Uganda and their phylogenetic relationship with those of other primates.

Narumi Ota, Hideo Hasegawa, Matthew R McLennan, Takanori Kooriyama, Hiroshi Sato, Paula A Pebsworth, Michael A Huffman

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Royal Society open science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Cytochrome c oxidase subunit 1 gene reveals species composition and phylogenetic relationships of Oesophagostomum spp. infecting pigs in northeastern Brazil.Revista brasileira de parasitologia veterinaria = Brazilian journal of veterinary parasitology : Orgao Oficial do Colegio Brasileiro de Parasitologia Veterinaria · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 4 countries.

Narumi OtaDepartment of Biology, Faculty of Medicine , Oita University, 1-1 Idaigaoka , Hasama, Yufu, Oita 879-5593, Japan.
Hideo HasegawaDepartment of Biology, Faculty of Medicine , Oita University, 1-1 Idaigaoka , Hasama, Yufu, Oita 879-5593, Japan.
Matthew R McLennanFaculty of Humanities and Social Sciences, Anthropology Centre for Conservation, Environment and Development , Oxford Brookes University , Gipsy Lane Campus, Oxford OX3 0BP, UK.
Takanori KooriyamaDepartment of Veterinary Science, School of Veterinary Medicine , Rakuno Gakuen University , 582, Bunkyodai-Midori, Ebetsu, Hokkaido 069-8501, Japan.
Hiroshi SatoLaboratory of Parasitology , Joint Faculty of Veterinary Medicine, Yamaguchi University , 1677-1 Yoshida, Yamaguchi 7s53-8515, Japan.
Paula A PebsworthDepartment of Anthropology , The University of Texas , San Antonio, TX 78249, USA ; Department of Soil Science , Stellenbosch University , Stellenbosch, South Africa.
Michael A HuffmanSection of Social Systems Evolution , Primate Research Institute, Kyoto University , 41-2, Kanrin, Inuyama, Aichi 484-8506, Japan.
Oita University · JPKyoto University · JPOxford Brookes University · GBRakuno Gakuen University · JPStellenbosch University · ZAYamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oesophagostomum spp. are parasitic nematodes of mammals, including humans and other primates. To identify species and determine phylogeny, we analysed DNA sequences of adult and larval Oesophagostomum from wild chimpanzees in Bulindi, Uganda, which inhabit degraded forest fragments amid villages. Oesophagostome larvae and/or eggs from baboons in Tanzania and South Africa and from a Japanese macaque were also sequenced. Based on the internal transcribed spacer 2 (ITS2) of nuclear ribosomal DNA and partial cytochrome c oxidase subunit 1 gene (Cox1) of mtDNA, O. stephanostomum and O. bifurcum were identified from chimpanzees. Bulindi is the second locality where molecular detection of O. bifurcum in wild chimpanzees has been made. While most O. stephanostomum had ITS2 genotypes recorded previously, three new genotypes were detected. Among four ITS2 genotypes of O. bifurcum from chimpanzees, one was identical to that from various monkey species in Kibale, Uganda, and baboons from Tanzania and South Africa; another was shared by a baboon from Tanzania. No genotype was identical with that of the cryptic species reported from humans and monkeys in Kibale. Phylogeny based on Cox1 sequences of O. stephanostomum showed locality-dependent clades, whereas those of O. bifurcum formed clades composed of worms from different hosts and localities.

Indexed as

DNA sequencingMacaca fuscatanodular wormsPan troglodytesPapio spp.phylogeny

Identifiers

PMID26716002
PMCPMC4680617
OpenAlexW2205234048

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.