Evidence map›Paper›PMID 26715746›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Evolutionary transformation of rod photoreceptors in the all-cone retina of a diurnal garter snake.

Ryan K Schott, Johannes Müller, Clement G Y Yang, Nihar Bhattacharyya, Natalie Chan, Mengshu Xu, James M Morrow, Ana-Hermina Ghenu, Ellis R Loew, Vincent Tropepe and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 93 citations in OpenAlex.

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  17. Interphotoreceptor coupling: an evolutionary perspective.Pflugers Archiv : European journal of physiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Ryan K SchottDepartment of Ecology & Evolutionary Biology, University of Toronto, Toronto, ON, Canada M5S 3B2;
Johannes MüllerMuseum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, 10115 Berlin, Germany;
Clement G Y YangDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3G5;
Nihar BhattacharyyaDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3G5;
Natalie ChanDepartment of Ecology & Evolutionary Biology, University of Toronto, Toronto, ON, Canada M5S 3B2;
Mengshu XuDepartment of Ecology & Evolutionary Biology, University of Toronto, Toronto, ON, Canada M5S 3B2;
James M MorrowDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3G5;
Ana-Hermina GhenuDepartment of Ecology & Evolutionary Biology, University of Toronto, Toronto, ON, Canada M5S 3B2;
Ellis R LoewDepartment of Biomedical Sciences, Cornell University, Ithaca, NY 14853-6401;
Vincent TropepeDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3G5; Department of Ophthalmology & Vision Sciences, University of Toronto, Toronto ON, Canada M5T 3A9; Centre for the Analysis of Genome Evolution and Function, University of Toronto, Toronto, ON, Canada M5S 3B2.
Belinda S W ChangDepartment of Ecology & Evolutionary Biology, University of Toronto, Toronto, ON, Canada M5S 3B2; Department of Cell & Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3G5; Centre for the Analysis of Genome Evolution and Function, University of Toronto, Toronto, ON, Canada M5S 3B2 belinda.chang@utoronto.ca.
University of Toronto · CACornell University · USMuseum für Naturkunde · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vertebrate retinas are generally composed of rod (dim-light) and cone (bright-light) photoreceptors with distinct morphologies that evolved as adaptations to nocturnal/crepuscular and diurnal light environments. Over 70 years ago, the "transmutation" theory was proposed to explain some of the rare exceptions in which a photoreceptor type is missing, suggesting that photoreceptors could evolutionarily transition between cell types. Although studies have shown support for this theory in nocturnal geckos, the origins of all-cone retinas, such as those found in diurnal colubrid snakes, remain a mystery. Here we investigate the evolutionary fate of the rods in a diurnal garter snake and test two competing hypotheses: (i) that the rods, and their corresponding molecular machinery, were lost or (ii) that the rods were evolutionarily modified to resemble, and function, as cones. Using multiple approaches, we find evidence for a functional and unusually blue-shifted rhodopsin that is expressed in small single "cones." Moreover, these cones express rod transducin and have rod ultrastructural features, providing strong support for the hypothesis that they are not true cones, as previously thought, but rather are modified rods. Several intriguing features of garter snake rhodopsin are suggestive of a more cone-like function. We propose that these cone-like rods may have evolved to regain spectral sensitivity and chromatic discrimination as a result of ancestral losses of middle-wavelength cone opsins in early snake evolution. This study illustrates how sensory evolution can be shaped not only by environmental constraints but also by historical contingency in forming new cell types with convergent functionality.

Indexed as

Biological EvolutionCircadian RhythmAnimalsColubridaeImmunohistochemistryMiceModels, BiologicalMolecular Sequence DataRetinal Cone Photoreceptor CellsRetinal PigmentsRetinal Rod Photoreceptor CellsRhodopsinTransducinRetinal PigmentsRhodopsinTransducinreptile visionrhodopsin evolutionsnake photoreceptorsvisual evolutionvisual pigment

Identifiers

PMID26715746
PMCPMC4720304
OpenAlexW2211060246

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.