Evidence map›Paper›PMID 26715665›Full record

ArticleGenetics2016

Distinct Roles of Chromatin Insulator Proteins in Control of the Drosophila Bithorax Complex.

Mikhail Savitsky, Maria Kim, Oksana Kravchuk, Yuri B Schwartz

Abstract read
In one paragraph

Article in Genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
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  7. eLife · 2024
    Article
  8. The N-Terminal Part ofInternational journal of molecular sciences · 2023
    Article
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  11. Boundary Bypass Activity in thebioRxiv : the preprint server for biology · 2023
    Article
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  13. Mechanisms of Interaction between Enhancers and Promoters in ThreeInternational journal of molecular sciences · 2023
    Review
  14. eLife · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Mikhail SavitskyDepartment of Molecular Biology, Umeå University, 90187 Umeå, Sweden Koltzov Institute of Developmental Biology, Russian Academy of Sciences, 119334 Moscow, Russia.
Maria KimDepartment of Molecular Biology, Umeå University, 90187 Umeå, Sweden.
Oksana KravchukKoltzov Institute of Developmental Biology, Russian Academy of Sciences, 119334 Moscow, Russia.
Yuri B SchwartzDepartment of Molecular Biology, Umeå University, 90187 Umeå, Sweden yuri.schwartz@umu.se.
Umeå University · SEKoltzov Institute of Developmental Biology · RU

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
NIH HHS P40 OD018537NIH HHS P40OD018537
6 · The paper itself

Abstract

Chromatin insulators are remarkable regulatory elements that can bring distant genomic sites together and block unscheduled enhancer-promoter communications. Insulators act via associated insulator proteins of two classes: sequence-specific DNA binding factors and "bridging" proteins. The latter are required to mediate interactions between distant insulator elements. Chromatin insulators are critical for correct expression of complex loci; however, their mode of action is poorly understood. Here, we use the Drosophila bithorax complex as a model to investigate the roles of the bridging proteins Cp190 and Mod(mdg4). The bithorax complex consists of three evolutionarily conserved homeotic genes Ubx, abd-A, and Abd-B, which specify anterior-posterior identity of the last thoracic and all abdominal segments of the fly. Looking at effects of CTCF, mod(mdg4), and Cp190 mutations on expression of the bithorax complex genes, we provide the first functional evidence that Mod(mdg4) acts in concert with the DNA binding insulator protein CTCF. We find that Mod(mdg4) and Cp190 are not redundant and may have distinct functional properties. We, for the first time, demonstrate that Cp190 is critical for correct regulation of the bithorax complex and show that Cp190 is required at an exceptionally strong Fub insulator to partition the bithorax complex into two topological domains.

Indexed as

Insulator ElementsAllelesAnimalsChromatinDrosophilaDrosophila ProteinsEpistasis, GeneticGene Expression RegulationGene OrderGenes, HomeoboxMutationOrgan SpecificityPhenotypeProtein BindingChromatinDrosophila Proteinschromatinchromatin insulatorsDrosophilagene regulationHOX genes

Identifiers

PMID26715665
PMCPMC4788238
OpenAlexW2275372717

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.