Evidence map›Paper›PMID 26715595›Full record

ArticlePlant molecular biology2016

Rice GDP-mannose pyrophosphorylase OsVTC1-1 and OsVTC1-3 play different roles in ascorbic acid synthesis.

Hua Qin, Zaian Deng, Chuanyu Zhang, Yayun Wang, Juan Wang, Hai Liu, Zhili Zhang, Rongfeng Huang, Zhijin Zhang

Erratum issuedAbstract read
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In one paragraph

Article in Plant molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Salt Tolerance of Rice Is Enhanced by theInternational journal of molecular sciences · 2022
    Article
  7. Plants (Basel, Switzerland) · 2022
    Article
  8. PeerJ · 2022
    Article
  9. Article
  10. Article
  11. Advances and Challenges in the Breeding of Salt-Tolerant Rice.International journal of molecular sciences · 2020
    Review
  12. Article
  13. Cells · 2019
    Article
  14. Article
  15. Article
  16. Molecular Evolution of GDP-D-Mannose Epimerase (Frontiers in plant science · 2018
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Hua QinBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Zaian DengBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Chuanyu ZhangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yayun WangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Juan WangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Hai LiuDepartment of Biology, University of Virginia, Charlottesville, VA, 22903, USA.
Zhili ZhangHainan Academy of Agricultural Sciences, Haikou, 571000, China.
Rongfeng HuangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China. rfhuang@caas.cn.
Zhijin ZhangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China. zhangzhijin@caas.cn.
Institute of Crop Sciences · CNHainan Provincial Academy of Agricultural Sciences · CNBiotechnology Research Institute · CNUniversity of Virginia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GDP-D-mannose pyrophosphorylase (GMPase) catalyzes the synthesis of GDP-D-mannose, which is a precursor for ascorbic acid (AsA) synthesis in plants. The rice genome encodes three GMPase homologs OsVTC1-1, OsVTC1-3 and OsVTC1-8, but their roles in AsA synthesis are unclear. The overexpression of OsVTC1-1 or OsVTC1-3 restored the AsA synthesis of vtc1-1 in Arabidopsis, while that of OsVTC1-8 did not, indicating that only OsVTC1-1 and OsVTC1-3 are involved in AsA synthesis in rice. Similar to Arabidopsis VTC1, the expression of OsVTC1-1 was high in leaves, induced by light, and inhibited by dark. Unlike OsVTC1-1, the expression level of OsVTC1-3 was high in roots and quickly induced by the dark, while the transcription level of OsVTC1-8 did not show obvious changes under constant light or dark treatments. In OsVTC1-1 RNAi plants, the AsA content of rice leaves decreased, and the AsA production induced by light was limited. In contrast, OsVTC1-3 RNAi lines altered AsA synthesis levels in rice roots, but not in the leaves or under the light/dark treatment. The enzyme activity showed that OsVTC1-1 and OsVTC1-3 had higher GMPase activities than OsVTC1-8 in vitro. Our data showed that, unlike in Arabidopsis, the rice GPMase homologous proteins illustrated a new model in AsA synthesis: OsVTC1-1 may be involved in the AsA synthesis, which takes place in leaves, while OsVTC1-3 may be responsible for AsA synthesis in roots. The different roles of rice GMPase homologous proteins in AsA synthesis may be due to their differences in transcript levels and enzyme activities.

Indexed as

Arabidopsis ProteinsAscorbic AcidGene Expression Regulation, PlantNucleotidyltransferasesOryzaPlant ProteinsPlants, Genetically ModifiedArabidopsis ProteinsAscorbic Acidmannose 1-phosphate guanylyltransferaseNucleotidyltransferasesPlant ProteinsAscorbic acidGDP-D-mannose pyrophosphorylaseL-galactose pathwayRice

Identifiers

PMID26715595
OpenAlexW2202904219

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.