Evidence map›Paper›PMID 26715268›Full record

ArticleTumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine2016

Association of Wnt signaling pathway genetic variants in gallbladder cancer susceptibility and survival.

Anu Yadav, Annapurna Gupta, Saurabh Yadav, Neeraj Rastogi, Sushma Agrawal, Ashok Kumar, Vijay Kumar, Sanjeev Misra, Balraj Mittal

Abstract read
PubMed Publisher
In one paragraph

Article in Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. New insights into the association betweenCancer cell international · 2019
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Anu YadavDepartment of Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, India.
Annapurna GuptaDepartment of Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, India.
Saurabh YadavDepartment of Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, India.
Neeraj RastogiDepartment of Radiotherapy, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, India.
Sushma AgrawalDepartment of Radiotherapy, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, India.
Ashok KumarDepartment of Gastroenterology, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, India.
Vijay KumarSurgical Oncology, Kgmu, Lucknow (U.P.), Lucknow, India.
Sanjeev MisraDirector of AIIMS, Jodhpur, Rajasthan.
Balraj MittalDepartment of Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, India. bml_pgi@yahoo.com.
Sanjay Gandhi Post Graduate Institute of Medical Sciences · INAll India Institute of Medical Sciences Jodhpur · INKing George's Medical University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gallbladder cancer (GBC) is the most common malignancy of the biliary tract with adverse prognosis and poor survival. Wnt signaling plays an important role in embryonic development and regeneration of tissues in all the species. Deregulation of expression and mutations in this pathway may lead to disease state such as cancer. In this study, we assessed the association of common germline variants of Wnt pathway genes (SFRP2, SFRP4, DKK2, DKK3, WISP3, APC, β-catenin, AXIN-2, GLI-1) to evaluate their contribution in predisposition to GBC and treatment outcomes. The study included 564 GBC patients and 250 controls. Out of 564, 200 patients were followed up for treatment response and survival. Tumor response (RECIST 1.1) was recorded in 116 patients undergoing non-adjuvant chemotherapy (NACT). Survival was assessed by Kaplan-Meier curve and Cox-proportional hazard regression. Single locus analysis showed significant association of SFRP4 rs1802073G > T [p value = 0.0001], DKK2 rs17037102C > T [p value = 0.0001], DKK3 rs3206824C > T [p value = 0.012], APC rs4595552 A/T [p value = 0.021], APC rs11954856G > T [p value = 0.047], AXIN-2 rs4791171C > T [p value = 0.001], β-catenin rs4135385A > G [p value = 0.031], and GLI-1 rs222826C > G [p value = 0.001] with increased risk of GBC. Gene-gene interaction using GMDR analysis predicted APC rs11954856 and AXIN2 rs4791171 as significant in conferring GBC susceptibility. Cox-proportional hazard model showed GLI-1 rs2228226 CG/GG and AXIN-2 rs4791171 TT genotype higher hazard ratio. In recursive partitioning, AXIN-2 rs4791171 TT genotype showed higher mortality and hazard. Most of studied genetic variants influence GBC susceptibility. APC rs11954856, GLI-1 rs2228226, and AXIN-2 rs4791171 were found to be associated with poor survival in advanced GBC patients.

Indexed as

Genetic Predisposition to DiseaseAdultBiomarkers, TumorCase-Control StudiesFemaleFollow-Up StudiesGallbladder NeoplasmsGenotypeHumansMaleMiddle AgedNeoplasm GradingNeoplasm StagingPolymorphism, Single NucleotidePrognosisReal-Time Polymerase Chain ReactionBiomarkers, TumorRNA, MessengerGeneralized multifactor dimensionality reduction (GMDR)HaplotypeRecursive partitioningSurvivalWnt pathway genes

Identifiers

PMID26715268
OpenAlexW2218371147

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.