Evidence map›Paper›PMID 26714766›Full record

ArticleItalian journal of pediatrics2015

Polymorphisms in the IL-6 and IL-6R receptor genes as new diagnostic biomarkers of acute appendicitis: a study on two candidate genes in pediatric patients with acute appendicitis.

Sevgi Büyükbeşe Sarsu, Şenay Görücü Yılmaz, Ali Bayram, Affan Denk, Kürşat Kargun, Mehmet Ali Sungur

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Article in Italian journal of pediatrics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Sevgi Büyükbeşe SarsuDepartment of Pediatric Surgery, Gaziantep Children Hospital, Gaziantep, 27560, Turkey. sarsusevgi@yahoo.com.tr.
Şenay Görücü YılmazDepartment of Nutrition and Dietetics, Faculty of Health Sciences, Gaziantep University, Gaziantep, 27310, Turkey. gorucu@gantep.edu.tr.
Ali BayramDepartment of Medical Biology and Genetics, Elazığ High School of Health Sciences, Fırat University, Elazığ, 23100, Turkey. abayram@firat.edu.tr.
Affan DenkDepartment of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Fırat University, Elazığ, 23100, Turkey. affandenk@firat.edu.tr.
Kürşat KargunDepartment of Medical Biology and Genetics, Elazığ High School of Health Sciences, Fırat University, Elazığ, 23100, Turkey. kkargun@firat.edu.tr.
Mehmet Ali SungurDepartment of Biostatistics and Medical Informatics, Faculty of Medicine, Düzce University, Düzce, 81620, Turkey. malisungur@yahoo.com.
Fırat University · TRDüzce Üniversitesi · TRGaziantep Children's Hospital · TRGaziantep University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAcute appendicitis (AA) (OMIM: 107700) is an inflammatory disease which is characterized by appendiceal inflammation. Genetic and environmental factors contribute to the development of AA. Especially, multiple genetic factors appear to be promising in the explanation of etiopathogenesis of AA. IL-6 (Interleukin-6) is an inflammatory cytokine and IL-6 receptor (IL-6R) plays an important role in the immune response. IL-6 (-572G/C rs1800796) and IL-6R (1:G.154448302 T > C rs7529229) gene polymorphisms may have an impact on cytokine production, immune response and these gene polymorphisms may be used as inflammatory markers in the diagnosis of appendicitis.

methodA total of 75 children with appendicitis, and 75 healthy children were included in the study. DNA extracts were obtained from peripheral lymphocytes. Single-nucleotide polymorphisms (SNPs) were analysed using an automated SYBR® Green RT-PCR system in pediatric patients with appendicitis (n = 75) and healthy controls (n = 75).

resultsThe allele and genotype frequencies for IL-6 rs1800796 and IL-6R rs7529229 polymorphisms were not different between the study groups (p > 0.05). Any statistically significant differences as for age, sex and other laboratory factors were not detected between the patients with appendicitis for genotype-allele frequencies (p > 0.05). Still in analyses performed to determine correlations among age, and gender of the patients, routine laboratory parameters and allele-genotype frequencies, a statistically significant intergroup difference was not detected. Genotype and allele frequencies were consistent with Hardy-Weinberg equilibrium (HWE) in all groups. DISCUSSION: This is the first study to investigate the effects of functional two polymorphisms on IL-6 and IL-6R genes in a pediatric patient group with AA risk. With this study we investigated the contribution of IL-6 (-572G/C rs1800796) and IL-6R (1:G.154448302 T > C rs7529229) polymorphisms on pathogenesis, and severity of AA in pediatric patients with AA: These results will guide further genetic researches to be performed on the role of IL-6 and IL-6R in AA.

conclusionsGiven the putative biological importance of this SNPs, these emerging data can provide a new foundation to stimulate future debate and genetic investigations of AA, focusing on new molecular mechanisms such as other IL gene polymorphisms, particularly in accessible peripheral tissues for novel molecular diagnostics for appendicitis.

Indexed as

Genetic Predisposition to DiseasePolymorphism, GeneticAcute DiseaseAdolescentAllelesAppendicitisBiomarkersChildDNAFemaleFollow-Up StudiesGene FrequencyGenotypeHumansInterleukin-6MaleBiomarkersDNAIL6 protein, humanIL6R protein, humanInterleukin-6Receptors, Interleukin-6

Identifiers

PMID26714766
PMCPMC4696224
OpenAlexW2208651278

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.