Evidence map›Paper›PMID 26714310›Full record

ArticlePloS one2015

Genome-Wide Linkage Mapping of QTL for Adult-Plant Resistance to Stripe Rust in a Chinese Wheat Population Linmai 2 × Zhong 892.

Jindong Liu, Zhonghu He, Ling Wu, Bin Bai, Weie Wen, Chaojie Xie, Xianchun Xia

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  7. Slow stripe rusting in Chinese wheat Jimai 44 conferred by Yr29 in combination with a major QTL on chromosome arm 6AL.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  8. Fine Mapping of Stripe-Rust-Resistance GenePlants (Basel, Switzerland) · 2022
    Article
  9. Article
  10. Article
  11. Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  12. Article
  13. Article
  14. Genome-wide mapping of adult plant stripe rust resistance in wheat cultivar Toni.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 1 country.

Jindong LiuInstitute of Crop Science/National Wheat Improvement Center, Chinese Academy of Agricultural Sciences, Beijing, China.
Zhonghu HeInstitute of Crop Science/National Wheat Improvement Center, Chinese Academy of Agricultural Sciences, Beijing, China.
Ling WuCrop Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Bin BaiWheat Research Institute, Gansu Academy of Agricultural Sciences, Lanzhou, Gansu, China.
Weie WenCollege of Agronomy, Xinjiang Agricultural University, Urumqi, Xinjiang, China.
Chaojie XieDepartment of Plant Genetics & Breeding/State Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing, China.
Xianchun XiaInstitute of Crop Science/National Wheat Improvement Center, Chinese Academy of Agricultural Sciences, Beijing, China.
Institute of Crop Sciences · CNChina Agricultural University · CNChinese Academy of Agricultural Sciences · CNGansu Academy of Agricultural Sciences · CNSichuan Academy of Agricultural Sciences · CNXinjiang Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stripe rust is one of the most devastating diseases of wheat (Triticum aestivum) worldwide. Adult-plant resistance (APR) is an efficient approach to provide long-term protection of wheat from the disease. The Chinese winter wheat cultivar Zhong 892 has a moderate level of APR to stripe rust in the field. To determine the inheritance of the APR resistance in this cultivar, 273 F6 recombinant inbred lines (RILs) were developed from a cross between Linmai 2 and Zhong 892. The RILs were evaluated for maximum disease severity (MDS) in two sites during the 2011-2012, 2012-2013 and 2013-2014 cropping seasons, providing data for five environments. Illumina 90k SNP (single nucleotide polymorphism) chips were used to genotype the RILs and their parents. Composite interval mapping (CIM) detected eight QTL, namely QYr.caas-2AL, QYr.caas-2BL.3, QYr.caas-3AS, QYr.caas-3BS, QYr.caas-5DL, QYr.caas-6AL, QYr.caas-7AL and QYr.caas-7DS.1, respectively. All except QYr.caas-2BL.3 resistance alleles were contributed by Zhong 892. QYr.caas-3AS and QYr.caas-3BS conferred stable resistance to stripe rust in all environments, explaining 6.2-17.4% and 5.0-11.5% of the phenotypic variances, respectively. The genome scan of SNP sequences tightly linked to QTL for APR against annotated proteins in wheat and related cereals genomes identified two candidate genes (autophagy-related gene and disease resistance gene RGA1), significantly associated with stripe rust resistance. These QTL and their closely linked SNP markers, in combination with kompetitive allele specific PCR (KASP) technology, are potentially useful for improving stripe rust resistances in wheat breeding.

Indexed as

Chromosome MappingGenomicsPlant BreedingDisease ResistanceGenetic MarkersGenome, PlantPhenotypePlant DiseasesPolymorphism, Single NucleotideQuantitative Trait LociTriticumGenetic Markers

Identifiers

PMID26714310
PMCPMC4694644
OpenAlexW2218883228

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.