Evidence map›Paper›PMID 26713109›Full record

ArticleACS medicinal chemistry letters2015

Structure-Activity Study of Bioisosteric Trifluoromethyl and Pentafluorosulfanyl Indole Inhibitors of the AAA ATPase p97.

Celeste Alverez, Michelle R Arkin, Stacie L Bulfer, Raffaele Colombo, Marina Kovaliov, Matthew G LaPorte, Chaemin Lim, Mary Liang, William J Moore, R Jeffrey Neitz and 4 more

Open access · greenAbstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  3. Article
  4. Review
  5. Article
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  7. Article
  8. Synthesis and Physicochemical Properties of 2-SFACS organic & inorganic Au · 2021
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  9. Review
  10. Article
  11. Chemical modulation of Kv7 potassium channels.RSC medicinal chemistry · 2021
    Review
  12. Article
  13. Article
  14. Synthesis and Optimization of KACS medicinal chemistry letters · 2019
    Article
  15. Article
  16. Article
  17. Article
  18. The AAA+ ATPase p97, a cellular multitool.The Biochemical journal · 2017
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Celeste AlverezDepartment of Pharmaceutical Sciences, University of Pittsburgh , Pittsburgh, Pennsylvania 15261, United States ; Chemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
Michelle R ArkinDepartment of Pharmaceutical Chemistry, Small Molecule Discovery Center, University of California , San Francisco, California 94158, United States.
Stacie L BulferDepartment of Pharmaceutical Chemistry, Small Molecule Discovery Center, University of California , San Francisco, California 94158, United States.
Raffaele ColomboChemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
Marina KovaliovChemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
Matthew G LaPorteChemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
Chaemin LimChemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
Mary LiangChemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
William J MooreLeidos Biomedical Research, Inc. , Frederick, Maryland 21702, United States.
R Jeffrey NeitzDepartment of Pharmaceutical Chemistry, Small Molecule Discovery Center, University of California , San Francisco, California 94158, United States.
Yongzhao YanChemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
Zhizhou YueChemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
Donna M HurynDepartment of Pharmaceutical Sciences, University of Pittsburgh , Pittsburgh, Pennsylvania 15261, United States ; Chemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
Peter WipfDepartment of Pharmaceutical Sciences, University of Pittsburgh , Pittsburgh, Pennsylvania 15261, United States ; Chemical Diversity Center, University of Pittsburgh , Pittsburgh, Pennsylvania 15260, United States.
University of Pittsburgh · USUniversity of California, San Francisco · USLeidos (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Exploratory SAR studies of a new phenyl indole chemotype for p97 inhibition revealed C-5 indole substituent effects in the ADPGlo assay that did not fully correlate with either electronic or steric factors. A focused series of methoxy-, trifluoromethoxy-, methyl-, trifluoromethyl-, pentafluorosulfanyl-, and nitro-analogues was found to exhibit IC50s from low nanomolar to double-digit micromolar. Surprisingly, we found that the trifluoromethoxy-analogue was biochemically a better match of the trifluoromethyl-substituted lead structure than a pentafluorosulfanyl-analogue. Moreover, in spite of their almost equivalent strongly electron-depleting effect on the indole core, pentafluorosulfanyl- and nitro-derivatives were found to exhibit a 430-fold difference in p97 inhibitory activities. Conversely, the electronically divergent C-5 methyl- and nitro-analogues both showed low nanomolar activities.

Indexed as

AAA ATPasefluorinated substituent effectsp97 inhibitorspentafluorosulfanyl-indolestructure−activity relationshipstrifluoromethyl-indole

Identifiers

PMID26713109
PMCPMC4677369
OpenAlexW2430786080

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.