Evidence map›Paper›PMID 26713053›Full record

ArticleJournal of Korean medical science2015

Urinary Nucleic Acid TSPAN13-to-S100A9 Ratio as a Diagnostic Marker in Prostate Cancer.

Chunri Yan, Ye-Hwan Kim, Ho Won Kang, Sung Phil Seo, Pildu Jeong, Il-Seok Lee, Dongho Kim, Jung Min Kim, Yung Hyun Choi, Sung-Kwon Moon and 2 more

Open access · goldAbstract readValidation Study
In one paragraph

Article in Journal of Korean medical science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Research landscape of liquid biopsies in prostate cancer.American journal of cancer research · 2019
    Review
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Chunri YanDepartment of Urology, College of Medicine, Chungbuk National University, Cheongju, Korea.ORCID 0000-0002-3043-6687
Ye-Hwan KimDepartment of Urology, College of Medicine, Chungbuk National University, Cheongju, Korea.ORCID 0000-0002-8676-7119
Ho Won KangDepartment of Urology, College of Medicine, Chungbuk National University, Cheongju, Korea.ORCID 0000-0002-8164-4427
Sung Phil SeoDepartment of Urology, College of Medicine, Chungbuk National University, Cheongju, Korea.
Pildu JeongDepartment of Urology, College of Medicine, Chungbuk National University, Cheongju, Korea.
Il-Seok LeeBio-Medical Science Co. Ltd, Daejeon, Korea.
Dongho KimBio-Medical Science Co. Ltd, Daejeon, Korea.
Jung Min KimNucleic Acid Research Center, Inc., Daejeon Oriental Hospital of Daejeon University, Daejeon, Korea.
Yung Hyun ChoiDepartment of Biochemistry, Dong-Eui University, Busan, Korea.ORCID 0000-0002-1454-3124
Sung-Kwon MoonDepartment of Food and Biotechnology, Chung-Ang University, Seoul, Korea.ORCID 0000-0002-4514-3457
Seok Joong YunDepartment of Urology, College of Medicine, Chungbuk National University, Cheongju, Korea.ORCID 0000-0001-7737-4746
Wun-Jae KimDepartment of Urology, College of Medicine, Chungbuk National University, Cheongju, Korea.ORCID 0000-0002-8060-8926
Chungbuk National University · KRBio-Medical Science (South Korea) · KRChung-Ang University · KRDaejeon Oriental Hospital · KRDong-Eui University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The potential use of urinary nucleic acids as diagnostic markers in prostate cancer (PCa) was evaluated. Ninety-five urine samples and 234 prostate tissue samples from patients with PCa and benign prostatic hyperplasia (BPH) were analyzed. Micro-array analysis was used to identify candidate genes, which were verified by the two-gene expression ratio and validated in tissue mRNA and urinary nucleic acid cohorts. Real-time quantitative polymerase chain reaction (qPCR) was used to measure urinary nucleic acid levels and tissue mRNA expression. The TSPAN13-to-S100A9 ratio was selected to determine the diagnostic value of urinary nucleic acids in PCa (P = 0.037) and shown to be significantly higher in PCa than in BPH in the mRNA and nucleic acid cohort analyses (P < 0.001 and P = 0.013, respectively). Receiver operating characteristic (ROC) analysis showed that the area under the ROC curve was 0.898 and 0.676 in tissue mRNA cohort and urinary nucleic acid cohort, respectively. The TSPAN13-to-S100A9 ratio showed a strong potential as a diagnostic marker for PCa. The present results suggest that the analysis of urine supernatant can be used as a simple diagnostic method for PCa that can be adapted to the clinical setting in the future.

Indexed as

AgedAged, 80 and overBiomarkers, TumorCalgranulin BCohort StudiesHumansMaleMiddle AgedNucleic AcidsOligonucleotide Array Sequence AnalysisProstateProstatic HyperplasiaProstatic NeoplasmsReal-Time Polymerase Chain ReactionRNA, MessengerRNA, NeoplasmBiomarkers, TumorCalgranulin BNucleic AcidsRNA, MessengerRNA, NeoplasmTetraspaninsTSPAN13 protein, humanCell-free Nucleic AcidDiagnostic MarkerProstatic NeoplasmsS100A9TSPAN13Two-gene Expression RatioUrine

Identifiers

PMID26713053
PMCPMC4689822
OpenAlexW2216553312

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.