Evidence map›Paper›PMID 26711751›Full record

ArticleAntimicrobial agents and chemotherapy2015

Mutations That Enhance the Ciprofloxacin Resistance of Escherichia coli with qnrA1.

Laura Vinué, Marian A Corcoran, David C Hooper, George A Jacoby

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Plasmid-mediated quinolone resistance in Enterobacteriaceae: a systematic review with a focus on Mediterranean countries.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
    Pooled it
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  3. Review
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  15. Prevalence and Characteristic of Swine-OriginFrontiers in microbiology · 2021
    Article
  16. Article
  17. Article
  18. Review
  19. Multiple Copies ofAntimicrobial agents and chemotherapy · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Laura VinuéLahey Hospital and Medical Center, Burlington, Massachusetts, USA Massachusetts General Hospital, Boston, Massachusetts, USA.
Marian A CorcoranLahey Hospital and Medical Center, Burlington, Massachusetts, USA.
David C HooperMassachusetts General Hospital, Boston, Massachusetts, USA.
George A JacobyLahey Hospital and Medical Center, Burlington, Massachusetts, USA gajacoby50@gmail.com.
Lahey Medical Center · USMassachusetts General Hospital · US

Funding

Plasmid-mediated Quinolone ResistanceR01AI057576 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI HOOPER, DAVID C · 2004 to 2018
$5.3M
NIAID NIH HHS R01 AI057576NIAID NIH HHS R01AI057576
6 · The paper itself

Abstract

Plasmid-mediated qnr genes provide only a modest decrease in quinolone susceptibility but facilitate the selection of higher-level resistance. In Escherichia coli strain J53 without qnr, ciprofloxacin resistance often involves mutations in the GyrA subunit of DNA gyrase. Mutations in gyrA were absent, however, when 43 mutants with decreased ciprofloxacin susceptibility were selected from J53(pMG252) with qnrA1. Instead, in 13 mutants, individual and whole-genome sequencing identified mutations in marR and soxR associated with increased expression of marA and soxS and, through them, increased expression of the AcrAB pump, which effluxes quinolones. Nine mutants had increased expression of the MdtE efflux pump, and six demonstrated increased expression of the ydhE pump gene. Many efflux mutants also had increased resistance to novobiocin, another pump substrate, but other mutants were novobiocin hypersusceptible. Mutations in rfaD and rfaE in the pathway for inner core lipopolysaccharide (LPS) biosynthesis were identified in five such strains. Many of the pump and LPS mutants had decreased expression of OmpF, the major porin channel for ciprofloxacin entry. Three mutants had increased expression of qnrA that persisted when pMG252 from these strains was outcrossed. gyrA mutations were also rare when mutants with decreased ciprofloxacin susceptibility were selected from E. coli J53 with aac(6')-Ib-cr or qepA. We suggest that multiple genes conferring low-level resistance contribute to enhanced ciprofloxacin resistance selected from an E. coli strain carrying qnrA1, aac(6')-Ib-cr, or qepA because these determinants decrease the effective ciprofloxacin concentration and allow more common but lower-resistance mutations than those in gyrA to predominate.

Indexed as

Anti-Bacterial AgentsATP-Binding Cassette, Sub-Family C ProteinsBacterial ProteinsCiprofloxacinDNA-Binding ProteinsDNA GyraseDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsLipopolysaccharidesLipoproteinsMembrane ProteinsMembrane Transport ProteinsMicrobial Sensitivity TestsNovobiocinAcrA protein, E coliAcrB protein, E coliAnti-Bacterial AgentsATP-Binding Cassette, Sub-Family C ProteinsBacterial ProteinsCiprofloxacinDNA-Binding ProteinsDNA GyraseEscherichia coli ProteinsLipopolysaccharidesLipoproteinsMarA protein, E coliMarR protein, E coliMdtE protein, E coliMembrane ProteinsMembrane Transport ProteinsNovobiocinOmpF proteinPorinsQnr protein, E coliRepressor ProteinsSoxR protein, BacteriaSoxS protein, E coliTrans-ActivatorsTranscription Factors

Identifiers

PMID26711751
PMCPMC4776012
OpenAlexW2214834197

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.