Evidence map›Paper›PMID 26711033›Full record

ArticleVeterinary microbiology2016

Comparative genomic analysis of the swine pathogen Bordetella bronchisepticastrain KM22.

Tracy L Nicholson, Sarah M Shore, Karen B Register, Darrell O Bayles, Robert A Kingsley, Brain W Brunelle

Abstract read
In one paragraph

Article in Veterinary microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tracy L NicholsonNational Animal Disease Center, ARS, USDA, Ames, IA, United States. Electronic address: tracy.nicholson@ARS.USDA.GOV.
Sarah M ShoreNational Animal Disease Center, ARS, USDA, Ames, IA, United States.
Karen B RegisterNational Animal Disease Center, ARS, USDA, Ames, IA, United States.
Darrell O BaylesNational Animal Disease Center, ARS, USDA, Ames, IA, United States.
Robert A KingsleyThe Wellcome Trust Sanger Institute, the Wellcome Trust Genome Campus, Hinxton, Cambridge, United Kingdom.
Brain W BrunelleNational Animal Disease Center, ARS, USDA, Ames, IA, United States.

Funding

Wellcome TrustWellcome Trust 098051
6 · The paper itself

Abstract

The well-characterized Bordetella bronchiseptica strain KM22, originally isolated from a pig with atrophic rhinitis, has been used to develop a reproducible swine respiratory disease model. The goal of this study was to identify genetic features unique to KM22 by comparing the genome sequence of KM22 to the laboratory reference strain RB50. To gain a broader perspective of the genetic relationship of KM22 among other B. bronchiseptica strains, selected genes of KM22 were then compared to five other B. bronchiseptica strains isolated from different hosts. Overall, the KM22 genome sequence is more similar to the genome sequences of the strains isolated from animals than the strains isolated from humans. The majority of virulence gene expression in Bordetella is positively regulated by the two-component sensory transduction system BvgAS. bopN, bvgA, fimB, and fimC were the most highly conserved BvgAS-regulated genes present in all seven strains analyzed. In contrast, the BvgAS-regulated genes present in all seven strains with the highest sequence divergence werefimN, fim2, fhaL, andfhaS. A total of eight major fimbrial subunit genes were identified in KM22. Quantitative real-time PCR data demonstrated that seven of the eight fimbrial subunit genes identified in KM22 are expressed and regulated by BvgAS. The annotation of the KM22 genome sequence, coupled with the comparative genomic analyses reported in this study, can be used to facilitate the development of vaccines with improved efficacy towards B. bronchiseptica in swine to decrease the prevalence and disease burden caused by this pathogen.

Indexed as

Genome, BacterialAnimalsBordetella bronchisepticaBordetella InfectionsDNA, BacterialGenomicsHumansPhylogenyPolymorphism, Single NucleotideReal-Time Polymerase Chain ReactionSwineDNA, BacterialBordetellaGenome sequenceSwine

Identifiers

PMID26711033
PMCPMC7117204

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.