Evidence map›Paper›PMID 26709890›Full record

ArticleCancer2016

Identification of patient subgroups with markedly disparate rates of MYCN amplification in neuroblastoma: A report from the International Neuroblastoma Risk Group project.

Daria Thompson, Kieuhoa T Vo, Wendy B London, Matthias Fischer, Peter F Ambros, Akira Nakagawara, Garrett M Brodeur, Katherine K Matthay, Steven G DuBois

Open access · bronzeAbstract read
In one paragraph

Article in Cancer, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 77 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 5 countries.

Daria ThompsonDepartment of Pediatrics, Benioff Children's Hospital, University of California San Francisco School of Medicine, San Francisco, California.
Kieuhoa T VoDepartment of Pediatrics, Benioff Children's Hospital, University of California San Francisco School of Medicine, San Francisco, California.
Wendy B LondonDana-Farber Children's Hospital Cancer and Blood Disorders Center, Harvard Medical School, Boston, Massachusetts.
Matthias FischerDepartment of Pediatric Oncology, Children's Hospital and Center for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Peter F AmbrosChildren's Cancer Research Institute, St. Anne Kinderkrebsforschung, Vienna, Austria.
Akira NakagawaraDepartment of Biochemistry, Chiba Cancer Center Research Institute and Chiba University, Chiba, Japan.
Garrett M BrodeurDepartment of Pediatrics, Children's Hospital of Philadelphia and Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
Katherine K MatthayDepartment of Pediatrics, Benioff Children's Hospital, University of California San Francisco School of Medicine, San Francisco, California.
Steven G DuBoisDepartment of Pediatrics, Benioff Children's Hospital, University of California San Francisco School of Medicine, San Francisco, California.
UCSF Benioff Children's Hospital · USUniversity of California, San Francisco · USChiba Cancer Center · JPChildren's Hospital of Philadelphia · USDana-Farber/Boston Children's Cancer and Blood Disorders Center · USSt. Anna Children's Cancer Research InstituteUniversity Hospital Cologne · DE

Funding

MOLECULAR GENETIC ANALYSIS OF NEUROBLASTOMAR01CA039771 · NCI · WASHINGTON UNIVERSITY · PI BRODEUR, GARRETT M · 1985 to 2013
$4.2M
NCI NIH HHS CA039771NCI NIH HHS R01 CA039771
6 · The paper itself

Abstract

backgroundMYCN gene amplification (MNA) is a hallmark of aggressive neuroblastoma. This study was performed to determine univariate and multivariate predictors of tumor MNA.

methodsData from the International Neuroblastoma Risk Group were analyzed for a subset of 7102 patients with known MYCN status. Chi-square testing and logistic regression were used to identify univariate and multivariate predictors of MYCN status. Recursive partitioning was used to identify groups of patients with maximal differences in rates of MNA.

resultsAll clinical features (age ≥ 18 months, high ferritin levels, high lactate dehydrogenase [LDH] levels, International Neuroblastoma Staging System stage 4, and adrenal sites) and pathological/biological features (DNA index ≤ 1, high mitosis-karyorrhexis index [MKI], undifferentiated/poorly differentiated grade, unfavorable histology according to the International Neuroblastoma Pathology Classification, and segmental chromosomal aberrations [SCAs]) were significantly associated with MNA. LDH (odds ratio [OR], 8.4; P < .001) and chromosomal 1p loss of heterozygosity (OR, 19.8; P < .001) were the clinical and biological variables, respectively, most strongly associated with MNA. In logistic regression, all variables except chromosome 17q aberration and pooled SCAs were independently predictive of MNA. Recursive partitioning identified subgroups with disparate rates of MNA, including subgroups with 85.7% MNA (patients with high LDH levels who had poorly differentiated adrenal tumors with chromosome 1p deletion) and 0.6% MNA (localized tumors having hyperdiploidy and low MKIs and lacking chromosome 1p aberrations).

conclusionsMNA is strongly associated with other clinical and biological variables in neuroblastoma. Recursive partitioning has identified subgroups of neuroblastoma patients with highly disparate rates of MNA. These findings can be used to inform investigations of molecular mechanisms of MNA.

Indexed as

Gene AmplificationAge FactorsChromosome AberrationsFemaleHumansInfantLogistic ModelsLoss of HeterozygosityMaleNeoplasm GradingNeoplasm StagingNeuroblastomaN-Myc Proto-Oncogene ProteinNuclear ProteinsOncogene ProteinsPredictive Value of TestsMYCN protein, humanN-Myc Proto-Oncogene ProteinNuclear ProteinsOncogene Proteinsdecision treesgene amplificationneuroblastomaneuroblastoma/geneticsoncogene proteins/genetics

Identifiers

PMID26709890
PMCPMC4777644
OpenAlexW2218422691

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.