Evidence map›Paper›PMID 26709854›Full record

ArticleJournal of visualized experiments : JoVE2015

Using Confocal Analysis of Xenopus laevis to Investigate Modulators of Wnt and Shh Morphogen Gradients.

Simon W Fellgett, Simon A Ramsbottom, Richard J Maguire, Stephen Cross, Peter O'Toole, Mary E Pownall

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Simon W FellgettDepartment of Biomedical Science, The Bateson Centre, University of Sheffield.
Simon A RamsbottomInstitute of Genetic Medicine, Newcastle University.
Richard J MaguireDepartment of Cardiovascular Science, The Bateson Centre, University of Sheffield.
Stephen CrossSchool of Biochemistry, University of Bristol.
Peter O'TooleBiology Department, University of York.
Mary E PownallBiology Department, University of York; betsy.pownall@york.ac.uk.
University of Sheffield · GBUniversity of York · GBNewcastle University · GBUniversity of Bristol · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H010297/1Medical Research Council
6 · The paper itself

Abstract

This protocol describes a method to visualise ligands distributed across a field of cells. The ease of expressing exogenous proteins, together with the large size of their cells in early embryos, make Xenopus laevis a useful model for visualising GFP-tagged ligands. Synthetic mRNAs are efficiently translated after injection into early stage Xenopus embryos, and injections can be targeted to a single cell. When combined with a lineage tracer such as membrane tethered RFP, the injected cell (and its descendants) that are producing the overexpressed protein can easily be followed. This protocol describes a method for the production of fluorescently tagged Wnt and Shh ligands from injected mRNA. The methods involve the micro dissection of ectodermal explants (animal caps) and the analysis of ligand diffusion in multiple samples. By using confocal imaging, information about ligand secretion and diffusion over a field of cells can be obtained. Statistical analyses of confocal images provide quantitative data on the shape of ligand gradients. These methods may be useful to researchers who want to test the effects of factors that may regulate the shape of morphogen gradients.

Indexed as

AnimalsEctodermFemaleHedgehog ProteinsLigandsMaleMicroscopy, ConfocalRNA, MessengerSignal TransductionWnt ProteinsXenopus laevisXenopus ProteinsHedgehog ProteinsLigandsRNA, MessengerShh protein, XenopusWnt ProteinsXenopus Proteins

Identifiers

PMID26709854
PMCPMC4694024
OpenAlexW2202662596

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.