Evidence map›Paper›PMID 26709222›Full record

ArticleThe Kaohsiung journal of medical sciences2015

Association of HLA and cytokine gene polymorphisms with idiopathic pulmonary fibrosis.

Hai-Ping Zhang, Jian Zou, Ping Xie, Fei Gao, Hui-Jun Mu

Open access · goldAbstract read
In one paragraph

Article in The Kaohsiung journal of medical sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Type 2 macrophages and Th2 CD4+ cells in interstitial lung diseases (ILDs): an overview.Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG · 2018
    Review
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hai-Ping ZhangDepartment of Derma Science Laboratory, Wuxi Number 2 People's Hospital Affiliated with Nanjing Medical University, Wuxi, Jiangsu Province, PR China.
Jian ZouDepartment of Clinical Laboratory Science, Wuxi People's Hospital Affiliated with Nanjing Medical University, Wuxi, Jiangsu Province, PR China; Jiangsu Key Laboratory of Organ Transplantation, Wuxi, Jiangsu Province, PR China.
Ping XieDepartment of Clinical Laboratory Science, Wuxi People's Hospital Affiliated with Nanjing Medical University, Wuxi, Jiangsu Province, PR China; Jiangsu Key Laboratory of Organ Transplantation, Wuxi, Jiangsu Province, PR China.
Fei GaoDepartment of Thoracic Surgery, Wuxi People's Hospital Affiliated with Nanjing Medical University, Wuxi, Jiangsu Province, PR China.
Hui-Jun MuDepartment of Clinical Laboratory Science, Wuxi People's Hospital Affiliated with Nanjing Medical University, Wuxi, Jiangsu Province, PR China; Jiangsu Key Laboratory of Organ Transplantation, Wuxi, Jiangsu Province, PR China. Electronic address: wxmuhj@gmail.com.
Wuxi People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Idiopathic pulmonary fibrosis (IPF) is a rare, progressive, and lethal interstitial lung disease with unknown etiology. Divergent observations have suggested that genetic factors contribute to IPF susceptibility. This study investigated the relationship between human leukocyte antigen (HLA), cytokine gene polymorphisms, and IPF in a Chinese Han population. The gene polymorphisms of HLA-A, -B, -DRB1, tumor necrosis factor alpha [TNF-α (-308 A/G)], transforming growth factor beta [TGF-β1 (+869 T/C)], interleukin 10 [IL-10 (-592 C/A, -819 T/C, and -1082 G/A)], and interferon gamma [IFN-γ (+874 T/A)] were detected in 102 individuals with IPF and 266 unrelated normal controls using PCR with sequence-specific primers and a high-resolution melt (HRM) approach. The data showed that there was no difference in HLA allele frequencies between the IPF and control groups. However, the data showed the frequency of HLA-A*02-DRB1*04 haplotype in the IPF group was significantly higher than that in the control group [odds ratio (OR) = 4.69, 95% confidence interval (CI) = 1.82-12.08, p < 0.001]. In addition, no differences in the allele and genotype distributions of the cytokines were found between the IPF and control groups (p > 0.01). Our findings suggest that there is an association between specific HLA haplotype and IPF genetic susceptibility and that the genetic variability of some cytokines may not be involved in the pathogenesis of IPF.

Indexed as

Genetic Predisposition to DiseaseAllelesCase-Control StudiesCytokinesFemaleGene FrequencyGenetic Association StudiesHaplotypesHLA AntigensHumansIdiopathic Pulmonary FibrosisLinkage DisequilibriumMaleMiddle AgedPolymorphism, Single NucleotideCytokinesHLA AntigensCytokineGene polymorphismHuman leukocyte antigenIdiopathic pulmonary fibrosis

Identifiers

PMID26709222
PMCPMC11916742
OpenAlexW2182951450

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.