Evidence map›Paper›PMID 26707565›Full record

ArticleEuropean journal of immunology2016

Type 1 diabetes associated HLA-DQ2 and DQ8 molecules are relatively resistant to HLA-DM mediated release of invariant chain-derived CLIP peptides.

Zemin Zhou, Eduardo Reyes-Vargas, Hernando Escobar, Brant Rudd, Alan L Rockwood, Julio C Delgado, Xiao He, Peter E Jensen

Open access · bronzeAbstract read
In one paragraph

Article in European journal of immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 32 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Sex as a modifier of genetic risk for type 1 diabetes.Diabetes, obesity & metabolism · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Zemin ZhouDepartment of Pathology, University of Utah, Salt Lake City, UT, USA.
Eduardo Reyes-VargasDepartment of Pathology, University of Utah, Salt Lake City, UT, USA.
Hernando EscobarARUP Laboratories, University of Utah, Salt Lake City, UT, USA.
Brant RuddDepartment of Pathology, University of Utah, Salt Lake City, UT, USA.
Alan L RockwoodDepartment of Pathology, University of Utah, Salt Lake City, UT, USA.
Julio C DelgadoDepartment of Pathology, University of Utah, Salt Lake City, UT, USA.
Xiao HeDepartment of Pathology, University of Utah, Salt Lake City, UT, USA.
Peter E JensenDepartment of Pathology, University of Utah, Salt Lake City, UT, USA.
University of Utah · USARUP Laboratories (United States) · US

Funding

Immunity to InsulinR37AI033614 · NIAID · UNIVERSITY OF UTAH · PI JENSEN, PETER E. · 2001 to 2010
$3.4M
REGULATION OF ANTIGEN PROCESSINGR01AI030554 · NIAID · UNIVERSITY OF UTAH · PI JENSEN, PETER E. · 1991 to 2009
$3.0M
Regulation of Antigen ProcessingR21AI030554 · NIAID · UNIVERSITY OF UTAH · PI JENSEN, PETER E. · 2004 to 2004
$370k
IMMUNITY TO INSULINR01AI033614 · NIAID · EMORY UNIVERSITY · PI JENSEN, PETER E. · 1993 to 2000
$287k
NIAID NIH HHS AI030554NIAID NIH HHS AI033614NIAID NIH HHS R01 AI030554NIAID NIH HHS R01 AI033614NIAID NIH HHS R21 AI030554NIAID NIH HHS R37 AI033614
6 · The paper itself

Abstract

HLA-DM is essential for editing peptides bound to MHC class II, thus influencing the repertoire of peptides mediating selection and activation of CD4(+) T cells. Individuals expressing HLA-DQ2 or DQ8, and DQ2/8 trans-dimers, have elevated risk for type 1 diabetes (T1D). Cells coexpressing DM with these DQ molecules were observed to express elevated levels of CLIP (Class II associated invariant chain peptide). Relative resistance to DM-mediated editing of CLIP was further confirmed by HPLC-MS/MS analysis of eluted peptides, which also demonstrated peptides from known T1D-associated autoantigens, including a shared epitope from ZnT8 that is presented by all four major T1D-susceptible DQ molecules. Assays with purified recombinant soluble proteins confirmed that DQ2-CLIP complexes are highly resistant to DM editing, whereas DQ8-CLIP is partially sensitive to DM, but with an apparent reduction in catalytic potency. DM sensitivity was enhanced in mutant DQ8 molecules with disruption of hydrogen bonds that stabilize DQ8 near the DM-binding region. Our findings show that T1D-susceptible DQ2 and DQ8 share significant resistance to DM editing, compared with control DQ molecules. The relative resistance of the T1D-susceptible DQ molecules to DM editing and preferential presentation of T1D-associated autoantigenic peptides may contribute to the pathogenesis of T1D.

Indexed as

Amino Acid SequenceAntigens, Differentiation, B-LymphocyteAutoantigensCD4-Positive T-LymphocytesCell LineDiabetes Mellitus, Type 1HEK293 CellsHistocompatibility Antigens Class IIHLA-D AntigensHLA-DQ AntigensHumansLymphocyte ActivationMolecular Sequence DataAntigens, Differentiation, B-LymphocyteAutoantigensHistocompatibility Antigens Class IIHLA-D AntigensHLA-DM antigensHLA-DQ2 antigenHLA-DQ8 antigenHLA-DQ Antigensinvariant chainAntigen presentationHLA-DMHLA-DQInvariant chain-derived CLIP peptidesType 1 diabetes

Identifiers

PMID26707565
PMCPMC4828309
OpenAlexW2198911210

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.