Evidence map›Paper›PMID 26703666›Full record

ArticleInternational journal of environmental research and public health2015

PVT1 Exon 9: A Potential Biomarker of Aggressive Prostate Cancer?

Adeodat Ilboudo, Jyoti Chouhan, Brian K McNeil, Joseph R Osborne, Olorunseun O Ogunwobi

Open access · goldAbstract readComparative Study
In one paragraph

Article in International journal of environmental research and public health, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. lncRNA PVT1: a novel oncogene in multiple cancers.Cellular & molecular biology letters · 2022
    Review
  6. Review
  7. Review
  8. Long non-coding RNA in prostate cancer.American journal of clinical and experimental urology · 2022
    Review
  9. Review
  10. Article
  11. MicroRNA-1205 Regulation of FRYL in Prostate Cancer.Frontiers in cell and developmental biology · 2021
    Article
  12. Article
  13. Biomarkers in Colorectal Cancer: Current Research and Future Prospects.International journal of molecular sciences · 2020
    Review
  14. Article
  15. Article
  16. Review
  17. Editorial: PVT1 in Cancer.Frontiers in oncology · 2020
    Article
  18. Article
  19. Interactions ofCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2019
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Adeodat IlboudoDepartment of Biological Sciences, Hunter College, The City University of New York, New York, NY 10065, USA. ailboudo@genectr.hunter.cuny.edu.
Jyoti ChouhanDepartment of Urology, State University of New York Downstate Medical Center, New York, NY 11203, USA. jyoti.d.chouhan@gmail.com.
Brian K McNeilDepartment of Urology, State University of New York Downstate Medical Center, New York, NY 11203, USA. Brian.McNeil@downstate.edu.
Joseph R OsborneDepartment of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA. osbornej@mskcc.org.
Olorunseun O OgunwobiDepartment of Biological Sciences, Hunter College, The City University of New York, New York, NY 10065, USA. ogunwobi@genectr.hunter.cuny.edu.
State University of New York · USCornell University · USHunter College · USMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Disparities in COVID Disease Severity and Outcomes in New York CityUL1TR002384 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI JULIANNE L IMPERATO-MCGINLEY · 2017 to 2026
$86.2M
Clinical and Translational Science CenterUL1TR000457 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI IMPERATO-MCGINLEY, JULIANNE L · 2012 to 2016
$46.0M
Training and Career Development and Education CoreU54CA137788 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Daniel Alan Heller · 2008 to 2026
$28.1M
Basic and Translational Research Center for Reducing Health DisparitiesG12MD007599 · NIMHD · HUNTER COLLEGE · PI ANGULO, JESUS A · 2012 to 2017
$14.6M
NCATS NIH HHS UL1 TR000457NCATS NIH HHS UL1 TR000457-06NCATS NIH HHS UL1 TR002384NCI NIH HHS P30 CA008748NCI NIH HHS U54 CA137788NIMHD NIH HHS 8 G12 MD007599NIMHD NIH HHS G12 MD007599
6 · The paper itself

Abstract

Prostate cancer (PCa) is the most commonly diagnosed cancer as well as the greatest source of cancer-related mortality in males of African ancestry (MoAA). Interestingly, this has been shown to be associated with single nucleotide polymorphisms around regions 2 and 3 of the 8q24 human chromosomal region. The non-protein coding gene locus Plasmacytoma Variant Translocation 1 (PVT1) is located at 8q24 and is overexpressed in PCa and, therefore, is also a candidate biomarker to explain the well-known disparity in this group. PVT1 has at least 12 exons that make separate transcripts which may have different functions, all of which are at present unknown in PCa. Our aim was to determine if any PVT1 transcripts play a role in aggressiveness and racial disparity in PCa. We used a panel of seven PCa cell lines including three derived from MoAA. Ribonucleic acid extraction, complementary deoxyribonucleic acid synthesis, and quantitative polymerase chain reaction (qPCR) were performed to evaluate expression of all 12 PVT1 exons. Each qPCR was performed in quadruplicates. At least four separate qPCR experiments were performed. Expression of PVT1 exons was inconsistent except for exon 9. There was no significant difference in exon 9 expression between cell lines derived from Caucasian males (CM), and an indolent cell line derived from MoAA. However, exon 9 expression in the aggressive MDA PCa 2b and E006AA-hT cell lines derived from MoAA was significantly higher than in other cell lines. Consequently, we observed differential expression of exon 9 of PVT1 in a manner that suggests that PVT1 exon 9 may be associated with aggressive PCa in MoAA.

Indexed as

Biomarkers, TumorBlack PeopleCell Line, TumorExonsHumansMaleMiddle AgedPolymorphism, Single NucleotideProstatic NeoplasmsTranslocation, GeneticWhite PeopleBiomarkers, Tumorbiomarkerdisparitymales of African ancestryprostate cancerPVT1 exon 9

Identifiers

PMID26703666
PMCPMC4730403
OpenAlexW2208736771

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.