Evidence map›Paper›PMID 26703469›Full record

ArticleThe Journal of biological chemistry2016

Bonded Cumomer Analysis of Human Melanoma Metabolism Monitored by 13C NMR Spectroscopy of Perfused Tumor Cells.

Alexander A Shestov, Anthony Mancuso, Seung-Cheol Lee, Lili Guo, David S Nelson, Jeffrey C Roman, Pierre-Gilles Henry, Dennis B Leeper, Ian A Blair, Jerry D Glickson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Review
  3. Carbon sources and pathways for citrate secreted by human prostate cancer cells determined by NMR tracing and metabolic modeling.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  4. Article
  5. Article
  6. Analysis of steady-state carbon tracer experiments using akaike information criteria.Metabolomics : Official journal of the Metabolomic Society · 2021
    Article
  7. Article
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  11. Imaging Cancer Metabolism: Underlying Biology and Emerging Strategies.Journal of nuclear medicine : official publication, Society of Nuclear Medicine · 2018
    Review
  12. Article
  13. Article
  14. Mechanism of antineoplastic activity of lonidamine.Biochimica et biophysica acta · 2016
    Review
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Alexander A ShestovFrom the Department of Radiology, Laboratory of Molecular Imaging, ashestov@mail.med.upenn.edu.
Anthony MancusoDepartment of Radiology and Abramson Comprehensive Cancer Center, and.
Seung-Cheol LeeFrom the Department of Radiology, Laboratory of Molecular Imaging.
Lili GuoSystems Pharmacology, Perelman School of Medicine, Philadelphia, Pennsylvania 19104.
David S NelsonFrom the Department of Radiology, Laboratory of Molecular Imaging.
Jeffrey C RomanFrom the Department of Radiology, Laboratory of Molecular Imaging.
Pierre-Gilles Henrythe Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota Medical School, Minneapolis, Minnesota 55455, and.
Dennis B Leeperthe Department of Radiation Oncology, Thomas Jefferson University, Philadelphia, Pennsylvania 19107.
Ian A BlairSystems Pharmacology, Perelman School of Medicine, Philadelphia, Pennsylvania 19104.
Jerry D GlicksonFrom the Department of Radiology, Laboratory of Molecular Imaging, Departments of Biochemistry and Biophysics and glickson@mail.med.upenn.edu.
Thomas Jefferson University · USUniversity of Minnesota · US

Funding

Translational Research Support CoreP30ES013508 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI Rebecca A Simmons · 2006 to 2026
$35.3M
Systemic Chemotherapy of Melanoma: NMR Studies of Lonidamine & N-Mustard ActivityR01CA129544 · NCI · UNIVERSITY OF PENNSYLVANIA · PI GLICKSON, JERRY D · 2009 to 2016
$3.2M
Mechanism of Activity of LonidamineR01CA172820 · NCI · UNIVERSITY OF PENNSYLVANIA · PI GLICKSON, JERRY D · 2013 to 2017
$2.8M
NCI NIH HHS R01 CA129544NCI NIH HHS R01CA129544NCI NIH HHS R01 CA172820NIEHS NIH HHS P30 ES013508
6 · The paper itself

Abstract

A network model for the determination of tumor metabolic fluxes from (13)C NMR kinetic isotopomer data has been developed and validated with perfused human DB-1 melanoma cells carrying the BRAF V600E mutation, which promotes oxidative metabolism. The model generated in the bonded cumomer formalism describes key pathways of tumor intermediary metabolism and yields dynamic curves for positional isotopic enrichment and spin-spin multiplets. Cells attached to microcarrier beads were perfused with 26 mm [1,6-(13)C2]glucose under normoxic conditions at 37 °C and monitored by (13)C NMR spectroscopy. Excellent agreement between model-predicted and experimentally measured values of the rates of oxygen and glucose consumption, lactate production, and glutamate pool size validated the model. ATP production by glycolytic and oxidative metabolism were compared under hyperglycemic normoxic conditions; 51% of the energy came from oxidative phosphorylation and 49% came from glycolysis. Even though the rate of glutamine uptake was ∼ 50% of the tricarboxylic acid cycle flux, the rate of ATP production from glutamine was essentially zero (no glutaminolysis). De novo fatty acid production was ∼ 6% of the tricarboxylic acid cycle flux. The oxidative pentose phosphate pathway flux was 3.6% of glycolysis, and three non-oxidative pentose phosphate pathway exchange fluxes were calculated. Mass spectrometry was then used to compare fluxes through various pathways under hyperglycemic (26 mm) and euglycemic (5 mm) conditions. Under euglycemic conditions glutamine uptake doubled, but ATP production from glutamine did not significantly change. A new parameter measuring the Warburg effect (the ratio of lactate production flux to pyruvate influx through the mitochondrial pyruvate carrier) was calculated to be 21, close to upper limit of oxidative metabolism.

Indexed as

Oxidative PhosphorylationAdenosine TriphosphateCarbon-13 Magnetic Resonance SpectroscopyCell Line, TumorCitric Acid CycleGlucoseGlutamineHumansMelanomaModels, TheoreticalMutation, MissenseOxygenProto-Oncogene Proteins B-rafAdenosine TriphosphateBRAF protein, humanGlucoseGlutamineOxygenProto-Oncogene Proteins B-rafbioenergycancer biologyglucose metabolismglutaminaseisotopic tracermathematical modelingmetabolismmitochondrial metabolismnuclear magnetic resonance (NMR)transport

Identifiers

PMID26703469
PMCPMC4777850
OpenAlexW2201863950

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.