Evidence map›Paper›PMID 26702065›Full record

ArticleBlood2016

Targetable genetic features of primary testicular and primary central nervous system lymphomas.

Bjoern Chapuy, Margaretha G M Roemer, Chip Stewart, Yuxiang Tan, Ryan P Abo, Liye Zhang, Andrew J Dunford, David M Meredith, Aaron R Thorner, Ekaterina S Jordanova and 21 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 301 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
301citing papers in PubMed, 2 pooled it
28.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

301 citing papers in PubMed, 2 syntheses or guidelines pooled it, 594 citations in OpenAlex.

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  18. MYD88L265P mutation is a highly specific marker for the nonGCB/ABC DLBCL molecular subtype.Virchows Archiv : an international journal of pathology · 2026
    Article
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241 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 8 institutions in 3 countries.

Bjoern ChapuyDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA;
Margaretha G M RoemerDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA; Department of Pathology, VU University Medical Center, Amsterdam, The Netherlands;
Chip StewartBroad Institute, Cambridge, MA;
Yuxiang TanSection of Computational Biomedicine, Boston University School of Medicine, Boston, MA;
Ryan P AboCenter for Cancer Genome Discovery, Dana-Farber Cancer Institute, Boston, MA;
Liye ZhangSection of Computational Biomedicine, Boston University School of Medicine, Boston, MA;
Andrew J DunfordBroad Institute, Cambridge, MA;
David M MeredithDepartment of Pathology, Brigham and Women's Hospital, Boston, MA;
Aaron R ThornerCenter for Cancer Genome Discovery, Dana-Farber Cancer Institute, Boston, MA;
Ekaterina S JordanovaCenter of Gynaecologic Oncology, VU University Medical Center, Amsterdam, The Netherlands;
Gang LiuSection of Computational Biomedicine, Boston University School of Medicine, Boston, MA;
Friedrich FeuerhakeDepartment of Pathology, Hannover Medical School, Hannover, Germany;
Matthew D DucarCenter for Cancer Genome Discovery, Dana-Farber Cancer Institute, Boston, MA;
Gerald IllerhausDepartment of Hematology and Oncology, University Hospital Freiburg, Freiburg, Germany;
Daniel GusenleitnerSection of Computational Biomedicine, Boston University School of Medicine, Boston, MA;
Erica A LindenMassachusetts General Hospital/North Shore Cancer Center, Danvers, MA;
Heather H SunDepartment of Pathology, Brigham and Women's Hospital, Boston, MA;
Heather HomerDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA;
Miyuki AonoDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA;
Geraldine S PinkusDepartment of Pathology, Brigham and Women's Hospital, Boston, MA;
Azra H LigonDepartment of Pathology, Brigham and Women's Hospital, Boston, MA;
Keith L LigonDepartment of Pathology, Brigham and Women's Hospital, Boston, MA;
Judith A FerryDepartment of Pathology, Massachusetts General Hospital, Boston, MA; and.
Gordon J FreemanDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA;
Paul van HummelenCenter for Cancer Genome Discovery, Dana-Farber Cancer Institute, Boston, MA;
Todd R GolubBroad Institute, Cambridge, MA; Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA.
Gad GetzBroad Institute, Cambridge, MA; Department of Pathology, Massachusetts General Hospital, Boston, MA; and.
Scott J RodigDepartment of Pathology, Brigham and Women's Hospital, Boston, MA;
Daphne de JongDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands;
Stefano MontiSection of Computational Biomedicine, Boston University School of Medicine, Boston, MA;
Margaret A ShippDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA;
Dana-Farber Cancer Institute · USBrigham and Women's Hospital · USBoston University · USBroad Institute · USAmsterdam UMC Location VUmc · NLMassachusetts General Hospital · USMedizinische Hochschule Hannover · DEUniversity Medical Center Freiburg · DE

Funding

Transgenic/KnockoutP01AI056299 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BLAZAR, BRUCE R · 2003 to 2023
$42.5M
Targetable Immune Evasion Pathways in Hodgkin LymphomaR01CA161026 · NCI · DANA-FARBER CANCER INST · PI SHIPP, MARGARET A · 2011 to 2020
$4.0M
NCI NIH HHS R01 CA161026NIAID NIH HHS P01 AI056299
6 · The paper itself

Abstract

Primary central nervous system lymphomas (PCNSLs) and primary testicular lymphomas (PTLs) are extranodal large B-cell lymphomas (LBCLs) with inferior responses to current empiric treatment regimens. To identify targetable genetic features of PCNSL and PTL, we characterized their recurrent somatic mutations, chromosomal rearrangements, copy number alterations (CNAs), and associated driver genes, and compared these comprehensive genetic signatures to those of diffuse LBCL and primary mediastinal large B-cell lymphoma (PMBL). These studies identify unique combinations of genetic alterations in discrete LBCL subtypes and subtype-selective bases for targeted therapy. PCNSLs and PTLs frequently exhibit genomic instability, and near-uniform, often biallelic, CDKN2A loss with rare TP53 mutations. PCNSLs and PTLs also use multiple genetic mechanisms to target key genes and pathways and exhibit near-uniform oncogenic Toll-like receptor signaling as a result of MYD88 mutation and/or NFKBIZ amplification, frequent concurrent B-cell receptor pathway activation, and deregulation of BCL6. Of great interest, PCNSLs and PTLs also have frequent 9p24.1/PD-L1/PD-L2 CNAs and additional translocations of these loci, structural bases of immune evasion that are shared with PMBL.

Indexed as

Genetic LociTranslocation, GeneticCentral Nervous System NeoplasmsFemaleHumansLymphoma, Large B-Cell, DiffuseMaleMediastinal NeoplasmsNeoplasm ProteinsTesticular NeoplasmsNeoplasm Proteins

Identifiers

PMID26702065
PMCPMC4760091
OpenAlexW94592798

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.