Evidence map›Paper›PMID 26702061›Full record

ArticleBlood2016

Structural basis for PECAM-1 homophilic binding.

Cathy Paddock, Dongwen Zhou, Panida Lertkiatmongkol, Peter J Newman, Jieqing Zhu

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. CD31 as a probable responding and gate-keeping protein of the blood-brain barrier and the risk of Alzheimer's disease.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
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  16. Article
  17. Article
  18. Article
  19. Article
  20. Serum CXCL13 and PECAM-1 can be used as diagnostic and prognostic markers in elderly patients with gastric cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Cathy PaddockBlood Research Institute, BloodCenter of Wisconsin, Milwaukee, WI; and.
Dongwen ZhouBlood Research Institute, BloodCenter of Wisconsin, Milwaukee, WI; and.
Panida LertkiatmongkolBlood Research Institute, BloodCenter of Wisconsin, Milwaukee, WI; and Department of Pharmacology and.
Peter J NewmanBlood Research Institute, BloodCenter of Wisconsin, Milwaukee, WI; and Department of Pharmacology and.
Jieqing ZhuBlood Research Institute, BloodCenter of Wisconsin, Milwaukee, WI; and Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI.
Versiti Blood Center of Wisconsin · US

Funding

MOLECULAR BIOLOGY &FUNCTION OF PLATELET MEMBRANE GP130R01HL040926 · NHLBI · VERSITI WISCONSIN, INC. · PI NEWMAN, PETER J · 1988 to 2017
$7.4M
Structural Transition of Cellular Integrins and Applications ThereofR01HL131836 · NHLBI · VERSITI WISCONSIN, INC. · PI Jieqing Zhu · 2016 to 2026
$5.5M
Conformational regulation in integrin bidirectional transmembrane signalingR56HL122985 · NHLBI · VERSITI WISCONSIN, INC. · PI ZHU, JIEQING · 2015 to 2015
$418k
NHLBI NIH HHS HL40926NHLBI NIH HHS R01 HL040926NHLBI NIH HHS R01 HL131836NHLBI NIH HHS R56 HL122985
6 · The paper itself

Abstract

Platelet endothelial cell adhesion molecule-1 (PECAM-1) is a 130-kDa member of the immunoglobulin gene superfamily (IgSF) that is present on the surface of circulating platelets and leukocytes, and highly expressed at the junctions of confluent endothelial cell monolayers. PECAM-1-mediated homophilic interactions, known to be mediated by its 2 amino-terminal immunoglobulin homology domains, are essential for concentrating PECAM-1 at endothelial cell intercellular junctions, where it functions to facilitate diapedesis, maintain vascular integrity, and transmit survival signals into the cell. Given the importance of PECAM-1-mediated homophilic interactions in mediating each of these cell physiological events, and to reveal the nature and orientation of the PECAM-1-PECAM-1 homophilic-binding interface, we undertook studies aimed at determining the crystal structure of the PECAM-1 homophilic-binding domain, which is composed of amino-terminal immunoglobulin homology domains 1 and 2 (IgD1 and IgD2). The crystal structure revealed that both IgD1 and IgD2 exhibit a classical IgSF fold, having a β-sandwich topology formed by 2 sheets of antiparallel β strands stabilized by the hallmark disulfide bond between the B and F strands. Interestingly, despite previous assignment to the C2 class of immunoglobulin-like domains, the structure of IgD1 reveals that it actually belongs to the I2 set of IgSF folds. Both IgD1 and IgD2 participate importantly in the formation of the trans homophilic-binding interface, with a total buried interface area of >2300 Å(2). These and other unique structural features of PECAM-1 allow for the development of an atomic-level model of the interactions that PECAM-1 forms during assembly of endothelial cell intercellular junctions.

Indexed as

Models, MolecularAmino Acid SequenceAnimalsCell AdhesionCrystallography, X-RayElectrophoresis, Polyacrylamide GelEndothelial CellsHumansIntercellular JunctionsMiceMolecular Sequence DataPlatelet Endothelial Cell Adhesion Molecule-1Protein BindingProtein Structure, TertiarySpecies SpecificityTransfectionPlatelet Endothelial Cell Adhesion Molecule-1

Identifiers

PMID26702061
PMCPMC4768429
OpenAlexW2444143487

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.