Evidence map›Paper›PMID 26702058›Full record

ArticleThe Journal of biological chemistry2016

Recombinant Collagen Engineered to Bind to Discoidin Domain Receptor Functions as a Receptor Inhibitor.

Bo An, Vittorio Abbonante, Huifang Xu, Despoina Gavriilidou, Ayumi Yoshizumi, Dominique Bihan, Richard W Farndale, David L Kaplan, Alessandra Balduini, Birgit Leitinger and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Review
  3. Prokaryotic Collagen-Like Proteins as Novel Biomaterials.Frontiers in bioengineering and biotechnology · 2022
    Review
  4. Article
  5. Article
  6. Collagen Mimetic Peptides.Bioengineering (Basel, Switzerland) · 2021
    Review
  7. Review
  8. Article
  9. Discoidin domain receptors: Micro insights into macro assemblies.Biochimica et biophysica acta. Molecular cell research · 2019
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Discoidin domain receptor 1 kinase activity is required for regulating collagen IV synthesis.Matrix biology : journal of the International Society for Matrix Biology · 2017
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

Bo AnFrom the Department of Biomedical Engineering, Tufts University, Medford, Massachusetts 02155.
Vittorio Abbonantethe Department of Molecular Medicine, Istituto di Ricerca e Cura a Carattere Scientifico San Matteo Foundation, University of Pavia, 27100 Pavia, Italy.
Huifang Xuthe Molecular Medicine Section, National Heart and Lung Institute, Imperial College London, London SW7 2AZ, United Kingdom.
Despoina Gavriilidouthe Molecular Medicine Section, National Heart and Lung Institute, Imperial College London, London SW7 2AZ, United Kingdom.
Ayumi Yoshizumithe Department of Microbiology and Infectious Diseases, Faculty of Medicine, Toho University School of Medicine, Tokyo 143-8540, Japan, and.
Dominique Bihanthe Department of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom.
Richard W Farndalethe Department of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom.
David L KaplanFrom the Department of Biomedical Engineering, Tufts University, Medford, Massachusetts 02155.
Alessandra BalduiniFrom the Department of Biomedical Engineering, Tufts University, Medford, Massachusetts 02155, the Department of Molecular Medicine, Istituto di Ricerca e Cura a Carattere Scientifico San Matteo Foundation, University of Pavia, 27100 Pavia, Italy.
Birgit Leitingerthe Molecular Medicine Section, National Heart and Lung Institute, Imperial College London, London SW7 2AZ, United Kingdom, b.leitinger@imperial.ac.uk.
Barbara BrodskyFrom the Department of Biomedical Engineering, Tufts University, Medford, Massachusetts 02155, barbara.brodsky@tufts.edu.
Imperial College London · GBTufts University · USUniversity of Cambridge · GBUniversity of Pavia · ITToho University · JP

Funding

Stuctural studies of triple-helical proteinsR01GM060048 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI BRODSKY, BARBARA M · 1999 to 2016
$5.1M
Biomaterial Applications of Recombinant Bacterial CollagensR01EB011620 · NIBIB · TUFTS UNIVERSITY MEDFORD · PI BRODSKY, BARBARA M, KAPLAN, DAVID L. · 2010 to 2013
$1.3M
Biotechnology and Biological Sciences Research Council BB/I011226/1British Heart Foundation RG/15/4/31268Medical Research Council G0500707Medical Research Council G0701121NIBIB NIH HHS EB011620NIBIB NIH HHS R01 EB011620NIGMS NIH HHS GM60048NIGMS NIH HHS R01 GM060048Wellcome Trust 094470/Z/10/Z
6 · The paper itself

Abstract

A bacterial collagen-like protein Scl2 has been developed as a recombinant collagen model system to host human collagen ligand-binding sequences, with the goal of generating biomaterials with selective collagen bioactivities. Defined binding sites in human collagen for integrins, fibronectin, heparin, and MMP-1 have been introduced into the triple-helical domain of the bacterial collagen and led to the expected biological activities. The modular insertion of activities is extended here to the discoidin domain receptors (DDRs), which are collagen-activated receptor tyrosine kinases. Insertion of the DDR-binding sequence from human collagen III into bacterial collagen led to specific receptor binding. However, even at the highest testable concentrations, the construct was unable to stimulate DDR autophosphorylation. The recombinant collagen expressed in Escherichia coli does not contain hydroxyproline (Hyp), and complementary synthetic peptide studies showed that replacement of Hyp by Pro at the critical Gly-Val-Met-Gly-Phe-Hyp position decreased the DDR-binding affinity and consequently required a higher concentration for the induction of receptor activation. The ability of the recombinant bacterial collagen to bind the DDRs without inducing kinase activation suggested it could interfere with the interactions between animal collagen and the DDRs, and such an inhibitory role was confirmed in vitro and with a cell migration assay. This study illustrates that recombinant collagen can complement synthetic peptides in investigating structure-activity relationships, and this system has the potential for the introduction or inhibition of specific biological activities.

Indexed as

Models, MolecularBacterial ProteinsBinding SitesCell MovementCells, CulturedCollagenCollagen Type IIIDiscoidin Domain ReceptorsFetal BloodHEK293 CellsHumansImmobilized ProteinsLigandsMegakaryocytesPeptide FragmentsProtein EngineeringBacterial ProteinsCollagenCollagen Type IIIDiscoidin Domain ReceptorsImmobilized ProteinsLigandsPeptide FragmentsReceptor Protein-Tyrosine KinasesReceptors, MitogenRecombinant Fusion ProteinsScl2 protein, Streptococcusbindingcollagendiscoidin domain receptorinhibition mechanismpeptidesprotein chimerarecombinant protein expressiontriple-helix

Identifiers

PMID26702058
PMCPMC4813464
OpenAlexW2285824369

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.