Evidence map›Paper›PMID 26701325›Full record

ArticleJournal of lipid research2016

A comparative study on fluorescent cholesterol analogs as versatile cellular reporters.

Erdinc Sezgin, Fatma Betul Can, Falk Schneider, Mathias P Clausen, Silvia Galiani, Tess A Stanly, Dominic Waithe, Alexandria Colaco, Alf Honigmann, Daniel Wüstner and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
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  4. Review of methods for the determination of cellular cholesterol content: principles, advantages, limitations, applications, and perspectives.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2025
    Review
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  7. Lipid Metabolism and Immune Function: Chemical Tools for Insights into T-Cell Biology.Chembiochem : a European journal of chemical biology · 2025
    Review
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  11. Imaging Plant Lipids with Fluorescent Reporters.Plants (Basel, Switzerland) · 2024
    Review
  12. Article
  13. Article
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  16. Article
  17. Article
  18. Article
  19. Roles of Cholesterol and PtdIns(4,5)PAdvances in experimental medicine and biology · 2023
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Erdinc SezginMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, OX39DS Oxford, United Kingdom erdinc.sezgin@rdm.ox.ac.uk christian.eggeling@rdm.ox.ac.uk.
Fatma Betul CanMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, OX39DS Oxford, United Kingdom.
Falk SchneiderMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, OX39DS Oxford, United Kingdom.
Mathias P ClausenMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, OX39DS Oxford, United Kingdom MEMPHYS-Center for Biomembrane Physics, Department of Physics, Chemistry, and Pharmacy, University of Southern Denmark, 5230 Odense M, Denmark.
Silvia GalianiMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, OX39DS Oxford, United Kingdom.
Tess A StanlyMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, OX39DS Oxford, United Kingdom.
Dominic WaitheMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, OX39DS Oxford, United Kingdom.
Alexandria ColacoDepartment of Pharmacology, University of Oxford, OX13QT Oxford, United Kingdom.
Alf HonigmannMax Planck Institute of Cell Biology and Genetics, 01307 Dresden, Germany.
Daniel WüstnerDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, 5230 Odense M, Denmark.
Frances PlattDepartment of Pharmacology, University of Oxford, OX13QT Oxford, United Kingdom.
Christian EggelingMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, OX39DS Oxford, United Kingdom erdinc.sezgin@rdm.ox.ac.uk christian.eggeling@rdm.ox.ac.uk.
University of Oxford · GBMRC Human Immunology Unit · GBMax Planck Institute of Molecular Cell Biology and Genetics · DEUniversity of Southern Denmark · DK

Funding

Medical Research Council G0902418Medical Research Council MC_UU_12010/9Medical Research Council MC_UU_12025Medical Research Council MR/K01577X/1Wellcome TrustWellcome Trust 104924/14/Z/14
6 · The paper itself

Abstract

Cholesterol (Chol) is a crucial component of cellular membranes, but knowledge of its intracellular dynamics is scarce. Thus, it is of utmost interest to develop tools for visualization of Chol organization and dynamics in cells and tissues. For this purpose, many studies make use of fluorescently labeled Chol analogs. Unfortunately, the introduction of the label may influence the characteristics of the analog, such as its localization, interaction, and trafficking in cells; hence, it is important to get knowledge of such bias. In this report, we compared different fluorescent lipid analogs for their performance in cellular assays: 1) plasma membrane incorporation, specifically the preference for more ordered membrane environments in phase-separated giant unilamellar vesicles and giant plasma membrane vesicles; 2) cellular trafficking, specifically subcellular localization in Niemann-Pick type C disease cells; and 3) applicability in fluorescence correlation spectroscopy (FCS)-based and super-resolution stimulated emission depletion-FCS-based measurements of membrane diffusion dynamics. The analogs exhibited strong differences, with some indicating positive performance in the membrane-based experiments and others in the intracellular trafficking assay. However, none showed positive performance in all assays. Our results constitute a concise guide for the careful use of fluorescent Chol analogs in visualizing cellular Chol dynamics.

Indexed as

Cell MembraneCholesterolFluorescenceFluorescent DyesHumansLipid BilayersSpectrometry, FluorescenceUnilamellar LiposomesCholesterolFluorescent DyesLipid BilayersUnilamellar Liposomescholesterol/metabolismcholesterol/traffickingfluorescence correlation spectroscopyfluorescence microscopygiant plasma membrane vesiclesgiant unilamellar vesicleslipid raftsmembranes/modelNiemann-Pick type C diseasestimulated emission depletion

Identifiers

PMID26701325
PMCPMC4727425
OpenAlexW2210154426

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.