Evidence map›Paper›PMID 26700681›Full record

ArticleDevelopment (Cambridge, England)2016

A novel role for Ascl1 in the regulation of mesendoderm formation via HDAC-dependent antagonism of VegT.

Li Gao, Xuechen Zhu, Geng Chen, Xin Ma, Yan Zhang, Aftab A Khand, Huijuan Shi, Fei Gu, Hao Lin, Yuemeng Chen and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
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  11. Review
  12. Conserved gene regulatory module specifies lateral neural borders across bilaterians.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Li GaoMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Xuechen ZhuMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Geng ChenMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Xin MaCAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China.
Yan ZhangMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Aftab A KhandMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Huijuan ShiMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Fei GuMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Hao LinMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Yuemeng ChenTianjin Normal University College of Life Science, Binshuixidao (extension line) 393, Xinqing District, Tianjin 300387, China.
Haiyan ZhangMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Lei HeMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China.
Qinghua TaoMOE Key Laboratory of Protein Sciences, Tsinghua University School of Life Sciences, Beijing 100084, China qhtaolab@tsinghua.edu.cn.
Tsinghua University · CNBeijing Institute of Genomics · CNTianjin Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Maternally expressed proteins function in vertebrates to establish the major body axes of the embryo and to establish a pre-pattern that sets the stage for later-acting zygotic signals. This pre-patterning drives the propensity of Xenopus animal cap cells to adopt neural fates under various experimental conditions. Previous studies found that the maternally expressed transcription factor, encoded by the Xenopus achaete scute-like gene ascl1, is enriched at the animal pole. Asc1l is a bHLH protein involved in neural development, but its maternal function has not been studied. Here, we performed a series of gain- and loss-of-function experiments on maternal ascl1, and present three novel findings. First, Ascl1 is a repressor of mesendoderm induced by VegT, but not of Nodal-induced mesendoderm. Second, a previously uncharacterized N-terminal domain of Ascl1 interacts with HDAC1 to inhibit mesendoderm gene expression. This N-terminal domain is dispensable for its neurogenic function, indicating that Ascl1 acts by different mechanisms at different times. Ascl1-mediated repression of mesendoderm genes was dependent on HDAC activity and accompanied by histone deacetylation in the promoter regions of VegT targets. Finally, maternal Ascl1 is required for animal cap cells to retain their competence to adopt neural fates. These results establish maternal Asc1l as a key factor in establishing pre-patterning of the early embryo, acting in opposition to VegT and biasing the animal pole to adopt neural fates. The data presented here significantly extend our understanding of early embryonic pattern formation.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBasic Helix-Loop-Helix ProteinsEctodermEmbryo, NonmammalianEndodermHistone DeacetylasesMesodermMorpholinosNerve Tissue ProteinsNeurogenesisProtein Structure, TertiaryT-Box Domain ProteinsXenopus laevisXenopus Proteinsascl1 protein, XenopusBasic Helix-Loop-Helix ProteinsHistone DeacetylasesMorpholinosNerve Tissue ProteinsT-Box Domain ProteinsVegT protein, XenopusXenopus ProteinsAscl1HDAC1MesendodermTranscriptional repressorVegTXenopus

Identifiers

PMID26700681
PMCPMC4760308
OpenAlexW2359145718

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.