Evidence map›Paper›PMID 26700643›Full record

ArticlePloS one2015

Sex Specification and Heterogeneity of Primordial Germ Cells in Mice.

Akihiko Sakashita, Yukiko Kawabata, Yuko Jincho, Shiun Tajima, Soichiro Kumamoto, Hisato Kobayashi, Yasuhisa Matsui, Tomohiro Kono

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Retrotransposons in the Mammalian Male Germline.Sexual development : genetics, molecular biology, evolution, endocrinology, embryology, and pathology of sex determination and differentiation · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Akihiko SakashitaDepartment of Bioscience, Tokyo University of Agriculture, Setagaya, Tokyo, Japan.
Yukiko KawabataDepartment of Bioscience, Tokyo University of Agriculture, Setagaya, Tokyo, Japan.
Yuko JinchoDepartment of Bioscience, Tokyo University of Agriculture, Setagaya, Tokyo, Japan.
Shiun TajimaDepartment of Bioscience, Tokyo University of Agriculture, Setagaya, Tokyo, Japan.
Soichiro KumamotoDepartment of Bioscience, Tokyo University of Agriculture, Setagaya, Tokyo, Japan.
Hisato KobayashiNODAI Genome Research Center, Tokyo University of Agriculture, Setagaya, Tokyo, Japan.
Yasuhisa MatsuiCell Resource Center for Biomedical Research, Institute of Development, Aging and Cancer, Tohoku University, Sendai, Miyagi, Japan.
Tomohiro KonoDepartment of Bioscience, Tokyo University of Agriculture, Setagaya, Tokyo, Japan.
Tokyo University of Agriculture · JPTohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mice, primordial germ cells migrate into the genital ridges by embryonic day 13.5 (E13.5), where they are then subjected to a sex-specific fate with female and male primordial germ cells undergoing mitotic arrest and meiosis, respectively. However, the sex-specific basis of primordial germ cell differentiation is poorly understood. The aim of this study was to investigate the sex-specific features of mouse primordial germ cells. We performed RNA-sequencing (seq) of E13.5 female and male mouse primordial germ cells using next-generation sequencing. We identified 651 and 428 differentially expressed transcripts (>2-fold, P < 0.05) in female and male primordial germ cells, respectively. Of these, many transcription factors were identified. Gene ontology and network analysis revealed differing functions of the identified female- and male-specific genes that were associated with primordial germ cell acquisition of sex-specific properties required for differentiation into germ cells. Furthermore, DNA methylation and ChIP-seq analysis of histone modifications showed that hypomethylated gene promoter regions were bound with H3K4me3 and H3K27me3. Our global transcriptome data showed that in mice, primordial germ cells are decisively assigned to a sex-specific differentiation program by E13.5, which is necessary for the development of vital germ cells.

Indexed as

DNA MethylationGene Expression Regulation, DevelopmentalAnimalsBiomarkersCell DifferentiationChromatin ImmunoprecipitationFemaleGerm CellsHigh-Throughput Nucleotide SequencingHistonesMaleMiceMice, Inbred C57BLPrincipal Component AnalysisSex FactorsSingle-Cell AnalysisBiomarkersHistones

Identifiers

PMID26700643
PMCPMC4689518
OpenAlexW2208639271

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.