Evidence map›Paper›PMID 26697387›Full record

ArticleGenomics data2015

Transcriptional changes in sensory ganglia associated with primary afferent axon collateral sprouting in spared dermatome model.

Benjamin J Harrison, Gayathri Venkat, Thomas Hutson, Kristofer K Rau, Mary Bartlett Bunge, Lorne M Mendell, Fred H Gage, Richard D Johnson, Caitlin Hill, Eric C Rouchka and 2 more

Open access · goldAbstract read
In one paragraph

Article in Genomics data, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Skin Reinnervation by Collateral Sprouting Following Spared Nerve Injury in Mice.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  4. Article
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  10. The Adaptor Protein CD2AP Is a Coordinator of Neurotrophin Signaling-Mediated Axon Arbor Plasticity.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2016
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Benjamin J HarrisonDepartment of Anatomical Sciences and Neurobiology, University of Louisville, Louisville, KY 40202, United States ; Kentucky Spinal Cord Injury Research Center (KSCIRC), University of Louisville, Louisville, KY 40202, United States ; Kentucky Biomedical Research Infrastructure Network Bioinformatics Core, University of Louisville, Louisville, KY 40292, United States.
Gayathri VenkatDepartment of Anatomical Sciences and Neurobiology, University of Louisville, Louisville, KY 40202, United States ; Kentucky Spinal Cord Injury Research Center (KSCIRC), University of Louisville, Louisville, KY 40202, United States.
Thomas HutsonWolfson Centre for Age Related Diseases, King's College, London, UK.
Kristofer K RauDepartment of Anatomical Sciences and Neurobiology, University of Louisville, Louisville, KY 40202, United States ; Kentucky Spinal Cord Injury Research Center (KSCIRC), University of Louisville, Louisville, KY 40202, United States ; Department of Anesthesiology and Perioperative Medicine, University of Louisville, Louisville, KY 40202, United States.
Mary Bartlett BungeMiami Project to Cure Paralysis, Department of Neurological Surgery and Neurology, University of Miami Miller School of Medicine, Miami, FL, 33136, United States ; Christopher and Dana Reeve Foundation International Consortium on Spinal Cord Injury Research.
Lorne M MendellChristopher and Dana Reeve Foundation International Consortium on Spinal Cord Injury Research ; Department of Neurobiology and Behavior, State University of New York at Stony Brook, Stony Brook, NY 11794, United States.
Fred H GageChristopher and Dana Reeve Foundation International Consortium on Spinal Cord Injury Research ; Laboratory of Genetics, The Salk Institute, La Jolla, CA 92037, United States.
Richard D JohnsonDepartment of Physiological Sciences, University of Florida, Gainesville, FL 32210, United States ; McKnight Brain Institute at the University of Florida, Gainesville, FL 32611, United States.
Caitlin HillWeill Medical College of Cornell University, Brain and Mind Research Institute, New York, NY, United States ; Burke Medical Research Institute, White Plains, NY 10605, United States.
Eric C RouchkaKentucky Biomedical Research Infrastructure Network Bioinformatics Core, University of Louisville, Louisville, KY 40292, United States ; Department of Computer Engineering and Computer Science, University of Louisville, Louisville, KY 40292, United States.
Lawrence MoonWolfson Centre for Age Related Diseases, King's College, London, UK.
Jeffrey C PetruskaDepartment of Anatomical Sciences and Neurobiology, University of Louisville, Louisville, KY 40202, United States ; Kentucky Spinal Cord Injury Research Center (KSCIRC), University of Louisville, Louisville, KY 40202, United States ; Department of Neurosurgery, University of Louisville, Louisville, KY 40202, United States.
University of Louisville · USKing's College London · GBCornell University · USSalk Institute for Biological Studies · USState University of New York · USUniversity of Florida · USUniversity of Miami · US

Funding

WKU Lead Faculty AwardP20GM103436 · NIGMS · UNIVERSITY OF LOUISVILLE · PI ERIC C ROUCHKA · 2012 to 2026
$60.1M
ZEBRAFISH VISUAL FUNCTION RECOVERY FOLLOWING OPTIC NERVE DAMAGEP20RR016481 · NCRR · UNIVERSITY OF LOUISVILLE · PI BARTON, HAZEL A · 2001 to 2011
$34.8M
Mechanisms of plasticity and repair after SCIP30GM103507 · NIGMS · UNIVERSITY OF LOUISVILLE · PI WHITTEMORE, SCOTT R · 2012 to 2015
$4.2M
Mechanisms controlling distinct modes of adult axon growthR01NS094741 · NINDS · UNIVERSITY OF LOUISVILLE · PI PETRUSKA, JEFFREY C · 2015 to 2019
$1.7M
Novel transgenic mice for tracing and electrophysiology of stressed neuronsR21NS080091 · NINDS · UNIVERSITY OF LOUISVILLE · PI HAI, TSONWIN, PETRUSKA, JEFFREY C · 2012 to 2014
$451k
Electrophysiological reporter for monitoring gene manipulationsR21NS071299 · NINDS · UNIVERSITY OF LOUISVILLE · PI PETRUSKA, JEFFREY C · 2011 to 2012
$411k
Medical Research Council G0600998NCRR NIH HHS P20 RR016481NIGMS NIH HHS P20 GM103436NIGMS NIH HHS P30 GM103507NINDS NIH HHS R01 NS094741NINDS NIH HHS R21 NS071299NINDS NIH HHS R21 NS080091
6 · The paper itself

Abstract

Primary afferent collateral sprouting is a process whereby non-injured primary afferent neurons respond to some stimulus and extend new branches from existing axons. Neurons of both the central and peripheral nervous systems undergo this process, which contributes to both adaptive and maladaptive plasticity (e.g., [1], [2], [3], [4], [5], [6], [7], [8], [9]). In the model used here (the "spared dermatome" model), the intact sensory neurons respond to the denervation of adjacent areas of skin by sprouting new axon branches into that adjacent denervated territory. Investigations of gene expression changes associated with collateral sprouting can provide a better understanding of the molecular mechanisms controlling this process. Consequently, it can be used to develop treatments to promote functional recovery for spinal cord injury and other similar conditions. This report includes raw gene expression data files from microarray experiments in order to study the gene regulation in spared sensory ganglia in the initiation (7 days) and maintenance (14 days) phases of the spared dermatome model relative to intact ("naïve") sensory ganglia. Data has been deposited into GEO (GSE72551).

Indexed as

Axonal plasticityAxon growthNerve injuryPainTranscriptomics

Identifiers

PMID26697387
PMCPMC4664766
OpenAlexW2101328782

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.