Evidence map›Paper›PMID 26697039›Full record

ArticleFrontiers in plant science2015

Proteomic Analysis of a Fraction with Intact Eyespots of Chlamydomonas reinhardtii and Assignment of Protein Methylation.

Nicole Eitzinger, Volker Wagner, Wolfram Weisheit, Stefan Geimer, David Boness, Georg Kreimer, Maria Mittag

Abstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
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  4. Review
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  9. Article
  10. Metabolic responses to ethanol and butanol inBiotechnology for biofuels · 2017
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Nicole EitzingerCell Biology, Department of Biology, Friedrich-Alexander-University Erlangen-Nuremberg Erlangen, Germany.
Volker WagnerInstitute of General Botany and Plant Physiology, Faculty of Biology and Pharmacy, Friedrich Schiller University Jena Jena, Germany.
Wolfram WeisheitInstitute of General Botany and Plant Physiology, Faculty of Biology and Pharmacy, Friedrich Schiller University Jena Jena, Germany.
Stefan GeimerCell Biology and Electron Microscopy, University of Bayreuth Bayreuth, Germany.
David BonessCell Biology, Department of Biology, Friedrich-Alexander-University Erlangen-Nuremberg Erlangen, Germany.
Georg KreimerCell Biology, Department of Biology, Friedrich-Alexander-University Erlangen-Nuremberg Erlangen, Germany.
Maria MittagInstitute of General Botany and Plant Physiology, Faculty of Biology and Pharmacy, Friedrich Schiller University Jena Jena, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Flagellate green algae possess a visual system, the eyespot. In Chlamydomonas reinhardtii it is situated at the edge of the chloroplast and consists of two carotenoid rich lipid globule layers subtended by thylakoid membranes (TM) that are attached to both chloroplast envelope membranes and a specialized area of the plasma membrane (PM). A former analysis of an eyespot fraction identified 203 proteins. To increase the understanding of eyespot related processes, knowledge of the protein composition of the membranes in its close vicinity is desirable. Here, we present a purification procedure that allows isolation of intact eyespots. This gain in intactness goes, however, hand in hand with an increase of contaminants from other organelles. Proteomic analysis identified 742 proteins. Novel candidates include proteins for eyespot development, retina-related proteins, ion pumps, and membrane-associated proteins, calcium sensing proteins as well as kinases, phosphatases and 14-3-3 proteins. Methylation of proteins at Arg or Lys is known as an important posttranslational modification involved in, e.g., signal transduction. Here, we identify several proteins from eyespot fractions that are methylated at Arg and/or Lys. Among them is the eyespot specific SOUL3 protein that influences the size and position of the eyespot and EYE2, a protein important for its development.

Indexed as

ATP synthaseChlamydomonas reinhardtiiEYE2eyespot proteomephototaxisprotein methylationSOUL heme-binding protein 3

Identifiers

PMID26697039
PMCPMC4678213

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.