Evidence map›Paper›PMID 26697025›Full record

ArticleFrontiers in plant science2015

Identification of New Resistance Loci to African Stem Rust Race TTKSK in Tetraploid Wheats Based on Linkage and Genome-Wide Association Mapping.

Giovanni Laidò, Giosuè Panio, Daniela Marone, Maria A Russo, Donatella B M Ficco, Valentina Giovanniello, Luigi Cattivelli, Brian Steffenson, Pasquale de Vita, Anna M Mastrangelo

Abstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Giovanni LaidòCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.
Giosuè PanioCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.
Daniela MaroneCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.
Maria A RussoCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.
Donatella B M FiccoCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.
Valentina GiovannielloCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.
Luigi CattivelliCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy ; Genomics Research Centre, Council for Agricultural Research and Economics Fiorenzuola d'Arda, Italy.
Brian SteffensonDepartment of Plant Pathology, University of Minnesota Twin Cities Minneapolis, MN, USA.
Pasquale de VitaCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.
Anna M MastrangeloCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stem rust, caused by Puccinia graminis Pers. f. sp. tritici Eriks. and E. Henn. (Pgt), is one of the most destructive diseases of wheat. Races of the pathogen in the "Ug99 lineage" are of international concern due to their virulence for widely used stem rust resistance genes and their spread throughout Africa. Disease resistant cultivars provide one of the best means for controlling stem rust. To identify quantitative trait loci (QTL) conferring resistance to African stem rust race TTKSK at the seedling stage, we evaluated an association mapping (AM) panel consisting of 230 tetraploid wheat accessions under greenhouse conditions. A high level of phenotypic variation was observed in response to race TTKSK in the AM panel, allowing for genome-wide association mapping of resistance QTL in wild, landrace, and cultivated tetraploid wheats. Thirty-five resistance QTL were identified on all chromosomes, and seventeen are of particular interest as identified by multiple associations. Many of the identified resistance loci were coincident with previously identified rust resistance genes; however, nine on chromosomes 1AL, 2AL, 4AL, 5BL, and 7BS may be novel. To validate AM results, a biparental population of 146 recombinant inbred lines was also considered, which derived from a cross between the resistant cultivar "Cirillo" and susceptible "Neodur." The stem rust resistance of Cirillo was conferred by a single gene on the distal region of chromosome arm 6AL in an interval map coincident with the resistance gene Sr13, and confirmed one of the resistance loci identified by AM. A search for candidate resistance genes was carried out in the regions where QTL were identified, and many of them corresponded to NBS-LRR genes and protein kinases with LRR domains. The results obtained in the present study are of great interest as a high level of genetic variability for resistance to race TTKSK was described in a germplasm panel comprising most of the tetraploid wheat sub-species.

Indexed as

association mappinglinkage mappingresistance genesstem rusttetraploid wheat

Identifiers

PMID26697025
PMCPMC4673868

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.