Evidence map›Paper›PMID 26695014›Full record

ArticleEuropean biophysics journal : EBJ2016

Phase transitions and structure analysis in wild-type, A30P, E46K, and A53T mutants of α-synuclein.

Mark A Healey, Michael T Woodside, Jack A Tuszynski

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Article in European biophysics journal : EBJ, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mark A HealeyDepartment of Physics, University of Alberta, Edmonton, AB, T6G2E1, Canada.
Michael T WoodsideDepartment of Physics, University of Alberta, Edmonton, AB, T6G2E1, Canada.
Jack A TuszynskiDepartment of Physics, University of Alberta, Edmonton, AB, T6G2E1, Canada. jtus@phys.ualberta.ca.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

α-Synuclein has been implicated in the development of neural plaques in Parkinson's Disease and Lewy-Body Dementia. This paper reports on the structural phase change behavior exhibited over a relevant range of temperatures in canonical protein Monte Carlo simulations for wild-type α-synuclein and three of its familial variants. We performed and analyzed these simulations to determine residue occupancy variations above and below this phase transition. From this analysis, we found regions above the phase transition temperature that consistently exhibited increased propensity for formation of long-chain beta-sheets, suggesting a possible role in α-synuclein aggregation.

Indexed as

Monte Carlo MethodMutationPhase Transitionalpha-SynucleinMutant ProteinsProtein Structure, SecondaryTransition Temperaturealpha-SynucleinMutant ProteinsIntrinsically disordered proteinMonte Carlo simulationsMutationsParkinson’s diseasePhase transitionsα-Synuclein

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.