Evidence map›Paper›PMID 26694163›Full record

ArticlePloS one2015

Global miRNA Expression Profiling Identifies miR-1290 as Novel Potential oncomiR in Laryngeal Carcinoma.

Joanna Janiszewska, Marcin Szaumkessel, Magdalena Kostrzewska-Poczekaj, Kinga Bednarek, Julia Paczkowska, Joanna Jackowska, Reidar Grenman, Krzysztof Szyfter, Malgorzata Wierzbicka, Maciej Giefing and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
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  5. Article
  6. Ion Channel Dysregulation in Head and Neck Cancers: Perspectives for Clinical Application.Reviews of physiology, biochemistry and pharmacology · 2021
    Review
  7. Review
  8. Article
  9. Article
  10. LncRNAOncoTargets and therapy · 2020
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. The identification of induction chemo-sensitivity genes of laryngeal squamous cell carcinoma and their clinical utilization.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Interaction between MALAT-1, CCR7 and correlated genes in oral squamous cell carcinoma.International journal of clinical and experimental pathology · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Joanna JaniszewskaInstitute of Human Genetics, Polish Academy of Sciences, Department of Cancer Genetics, Poznan, Poland.
Marcin SzaumkesselInstitute of Human Genetics, Polish Academy of Sciences, Department of Cancer Genetics, Poznan, Poland.
Magdalena Kostrzewska-PoczekajInstitute of Human Genetics, Polish Academy of Sciences, Department of Cancer Genetics, Poznan, Poland.
Kinga BednarekInstitute of Human Genetics, Polish Academy of Sciences, Department of Cancer Genetics, Poznan, Poland.
Julia PaczkowskaInstitute of Human Genetics, Polish Academy of Sciences, Department of Cancer Genetics, Poznan, Poland.
Joanna JackowskaDepartment of Otolaryngology and Laryngological Oncology, University of Medical Sciences, Poznan, Poland.
Reidar GrenmanDepartment of Otorhinolaryngology, Head and Neck Surgery and Department of Medical Biochemistry, Turku University Hospital and University of Turku, Turku, Finland.
Krzysztof SzyfterInstitute of Human Genetics, Polish Academy of Sciences, Department of Cancer Genetics, Poznan, Poland.
Malgorzata WierzbickaDepartment of Otolaryngology and Laryngological Oncology, University of Medical Sciences, Poznan, Poland.
Maciej GiefingInstitute of Human Genetics, Polish Academy of Sciences, Department of Cancer Genetics, Poznan, Poland.
Malgorzata Jarmuz-SzymczakInstitute of Human Genetics, Polish Academy of Sciences, Department of Cancer Genetics, Poznan, Poland.
Polish Academy of Sciences · PLInstitute of Human Genetics · PLPoznan University of Medical Sciences · PLUniversity of Turku · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLaryngeal squamous cell carcinoma (LSCC) is the most common group among head and neck cancers. LSCC is characterized by a high incidence in Europe. With the aim of better understanding its genetic background we performed global miRNA expression profiling of LSCC cell lines and primary specimens. By this approach we identified a cohort of 33 upregulated and 9 downregulated miRNA genes in LSCC as compared to epithelial no tumor controls.

resultsWithin this group we identified overexpression of the novel miR-1290 gene not reported in the context of LSCC before. Using a combined bioinformatical approach in connection with functional analysis we delineated two putative target genes of miR-1290 namely ITPR2 and MAF which are significantly downregulated in LSCC. They are interesting candidates for tumor suppressor genes as they are implicated in apoptosis and other processes deregulated in cancer.

conclusionTaken together, we propose miR-1290 as the new oncomiR involved in LSCC pathogenesis. Additionally, we suggest that the oncogenic potential of miR-1290 might be expressed by the involvement in downregulation of its target genes MAF and ITPR2.

Indexed as

3' Untranslated RegionsAdultAgedCarcinoma, Squamous CellCell Line, TumorComputational BiologyFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansInositol 1,4,5-Trisphosphate ReceptorsLaryngeal NeoplasmsMaleMicroRNAsMiddle AgedOligonucleotide Array Sequence Analysis3' Untranslated RegionsInositol 1,4,5-Trisphosphate ReceptorsITPR2 protein, humanMAF protein, humanMicroRNAsMIRN1290 microRNA, humanProto-Oncogene Proteins c-maf

Identifiers

PMID26694163
PMCPMC4692263
OpenAlexW2197163652

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.