Evidence map›Paper›PMID 26693517›Full record

ArticleData in brief2015

Dataset for distribution of INGI/RIME and SLACS CRE transposable elements in Trypanosoma brucei genome.

Mohd Faheem Khan, Kush Shrivastava, Rebeka Sinha, Virender Kumar, A K Jaitly

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PubMed Full text at PMC Publisher
In one paragraph

Article in Data in brief, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Mohd Faheem KhanDepartment of Plant Sciences, M.J.P. Rohilkhand University, Bareilly, U.P., India.
Kush ShrivastavaDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., India.
Rebeka SinhaDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., India.
Virender KumarDepartment of Plant Sciences, M.J.P. Rohilkhand University, Bareilly, U.P., India.
A K JaitlyDepartment of Plant Sciences, M.J.P. Rohilkhand University, Bareilly, U.P., India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The current dataset is generated via bio-computational approach by surveying of INGI/RIME and SLACS CRE transposable elements (TEs) in latest update of Trypanosoma brucei genome. The distribution dataset (Supplementary File 1) shows the chromosome wise distribution of INGI/RIME and SLACS CRE transposable elements with the status of their -5' and -3' ends, genomic coverage and further elemental description about the completeness on the element. The 5' upstream flanking sequence of 100 bp was then analyzed to find out possible regions that could act as insertion hotspots. The Fig. 1 represents the ten different motifs found in the 5' flanking region of the INGI/RIME and SLACS CRE elements. The Supplementary File 2 describes the distribution of these ten motifs in different locations in Trypanosoma brucei genome. These new locations where motifs were found may provide useful information to track the future transposition events of INGI/RIME and SLACS CRE elements in different Trypanosoma species.

Indexed as

INGI/RIMESLACS CRETEsTrypanosoma brucei

Identifiers

PMID26693517
PMCPMC4660242

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.