Evidence map›Paper›PMID 26693171›Full record

ArticleData in brief2015

Delineating the glycoproteome of elongating cotton fiber cells.

Saravanan Kumar, Pankaj Pandey, Krishan Kumar, Vijayalakshmi Rajamani, Kethireddy Venkata Padmalatha, Gurusamy Dhandapani, Mogilicherla Kanakachari, Sadhu Leelavathi, Polumetla Ananda Kumar, Vanga Siva Reddy

Abstract read
In one paragraph

Article in Data in brief, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Saravanan KumarPlant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
Pankaj PandeyPlant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
Krishan KumarPlant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
Vijayalakshmi RajamaniPlant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
Kethireddy Venkata PadmalathaNational Research Centre on Plant Biotechnology (NRCPB), IARI, New Delhi, India.
Gurusamy DhandapaniNational Research Centre on Plant Biotechnology (NRCPB), IARI, New Delhi, India.
Mogilicherla KanakachariNational Research Centre on Plant Biotechnology (NRCPB), IARI, New Delhi, India.
Sadhu LeelavathiPlant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
Polumetla Ananda KumarNational Research Centre on Plant Biotechnology (NRCPB), IARI, New Delhi, India.
Vanga Siva ReddyPlant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The data presented here delineates the glycoproteome component in the elongating cotton fiber cells attained using complementary proteomic approaches followed by protein and N-linked glycosylation site identification (Kumar et al., 2013) [1]. Utilizing species specific protein sequence databases in proteomic approaches often leads to additional information that may not be obtained using cross-species databases. In this context we have reanalyzed our glycoproteome dataset with the Gossypium arboreum, Gossypium raimondii (version 2.0) and Gossypium hirsutum protein databases that has led to the identification of 21 N-linked glycosylation sites and 18 unique glycoproteins that were not reported in our previous study. The 1D PAGE and solution based glycoprotein identification data is publicly available at the ProteomeXchange Consortium via the PRIDE partner repository (Vizcaíno et al., 2013) [2] using the dataset identifier PXD000178 and the 2D PAGE based protein identification and glycopeptide approach based N-linked glycosylation site identification data is available at the ProteomeXchange Consortium via the PRIDE partner repository (Vizcaíno et al., 2013) [2] using the dataset identifier PXD002849.

Identifiers

PMID26693171
PMCPMC4652025

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.