Evidence map›Paper›PMID 26690570›Full record

ArticleBMC evolutionary biology2015

Adaptive evolution in the toxicity of a spider's venom enzymes.

Aurélio Pedroso, Sergio Russo Matioli, Mario Tyago Murakami, Giselle Pidde-Queiroz, Denise V Tambourgi

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Exploring Spiders Without Venom as New Sources of Peptidase Inhibitors.International journal of molecular sciences · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Tick-Borne Flavivirus Inhibits Sphingomyelinase (Frontiers in cellular and infection microbiology · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Aurélio PedrosoLaboratório de Imunoquímica, Instituto Butantan, São Paulo, S.P., Brazil. aurelio.junior@butantan.gov.br.
Sergio Russo MatioliDepartamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, São Paulo, S.P., Brazil. srmatiol@ib.usp.br.
Mario Tyago MurakamiLaboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, S.P., Brazil. mario.murakami@lnbio.cnpem.br.
Giselle Pidde-QueirozLaboratório de Imunoquímica, Instituto Butantan, São Paulo, S.P., Brazil. giselle.queiroz@butantan.gov.br.
Denise V TambourgiLaboratório de Imunoquímica, Instituto Butantan, São Paulo, S.P., Brazil. denise.tambourgi@butantan.gov.br.
Instituto Butantan · BRBrazilian Center for Research in Energy and Materials · BRUniversidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSphingomyelinase D is the main toxin present in the venom of Loxosceles spiders. Several isoforms present in these venoms can be structurally classified in two groups. Class I Sphingomyelinase D contains a single disulphide bridge and variable loop. Class II Sphingomyelinase D presents an additional intrachain disulphide bridge that links a flexible loop with a catalytic loop. These classes exhibit differences in their toxic potential. In this paper we address the distribution of the structural classes of SMase D within and among species of spiders and also their evolutionary origin by means of phylogenetic analyses. We also conducted tests to assess the action of natural selection in their evolution combined to structural modelling of the affected sites.

resultsThe majority of the Class I enzymes belong to the same clade, which indicates a recent evolution from a single common ancestor. Positively selected sites are located on the catalytic interface, which contributes to a distinct surface charge distribution between the classes. Sites that may prevent the formation of an additional bridge were found in Class I enzymes.

conclusionsThe evolution of Sphingomyelinase D has been driven by natural selection toward an increase in noxiousness, and this might help explain the toxic variation between classes.

Indexed as

Evolution, MolecularAnimalsModels, MolecularPhosphoric Diester HydrolasesPhylogenySelection, GeneticSpidersSpider VenomsPhosphoric Diester Hydrolasessphingomyelin phosphodiesterase DSpider Venoms

Identifiers

PMID26690570
PMCPMC4687385
OpenAlexW2207865507

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.