Evidence map›Paper›PMID 26690518›Full record

ArticleJournal of genetics2015

Combined effect between two functional polymorphisms of SLC6A12 gene is associated with temporal lobe epilepsy.

Jingyun Li, Hua Lin, Fenghe Niu, Xilin Zhu, Ning Shen, Xin Wang, Liping Li, Aihua Liu, Xiaopan Wu, Wei Sun and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Involvement of upregulation of miR-210 in a rat epilepsy model.Neuropsychiatric disease and treatment · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Jingyun LiNational Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences; School of Basic Medicine, Peking Union Medical College, Beijing 100005, People's Republic of China. wangyuping01@sina.cn.
Hua Lin
Fenghe Niu
Xilin Zhu
Ning Shen
Xin Wang
Liping Li
Aihua Liu
Xiaopan Wu
Wei Sun
Yuping Wang
Ying Liu
Capital Medical University · CNPeking Union Medical College Hospital · CNAcademy of Medical Sciences · GBChinese Academy of Medical Sciences & Peking Union Medical College · CNMRC Laboratory of Molecular Biology · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Temporal lobe epilepsy (TLE) is the most common epilepsy subtype with complex genetic structure. A recent study in four populations (Ireland, UK, Australia and Finland) reported an allelic association between betaine/GABA transporter-1(BGT-1 or SLC6A12) and mesial temporal lobe epilepsy with hippocampal sclerosis. To demonstrate the association between SLC6A12 gene polymorphisms and TLE, TaqMan method was used to genotype five single-nucleotide polymorphisms of SLC6A12 gene in 358 TLE patients and 596 nonepileptic control subjects of Chinese Han origin. Real-time PCR was used to detect the effects of variations on gene expression associated with TLE. Though, the single-marker analysis did not demonstrate allelic association with TLE, rs542736-rs557881 interaction showed significant association. The SLC6A12 expression levels in peripheral blood mononuclear cells were significantly higher in TLE patients than in control subjects and were correlated to rs542736 G-rs557881 A haplotypes. Our preliminary results suggested combined effect of two common polymorphisms on SLC6A12 gene may be associated with TLE, but the precise mechanism needs further investigation.

Indexed as

AdultAsian PeopleCarrier ProteinsCase-Control StudiesEpilepsy, Temporal LobeFemaleGABA Plasma Membrane Transport ProteinsGenetic Predisposition to DiseaseHumansMalePolymorphism, Single Nucleotidebetaine plasma membrane transport proteinsCarrier ProteinsGABA Plasma Membrane Transport Proteins

Identifiers

PMID26690518
OpenAlexW2423766357

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.