Evidence map›Paper›PMID 26690199›Full record

Trial reportViruses2015

Emergent HIV-1 Drug Resistance Mutations Were Not Present at Low-Frequency at Baseline in Non-Nucleoside Reverse Transcriptase Inhibitor-Treated Subjects in the STaR Study.

Danielle P Porter, Martin Daeumer, Alexander Thielen, Silvia Chang, Ross Martin, Cal Cohen, Michael D Miller, Kirsten L White

Open access · goldAbstract readClinical Trial, Phase IIIMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in Viruses, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Article
  6. Article
  7. Article
  8. Observational
  9. Article
  10. Article
  11. Hotspots of Transmission Driving the Local Human Immunodeficiency Virus Epidemic in the Cologne-Bonn Region, Germany.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Danielle P PorterGilead Sciences, 333 Lakeside Drive, Foster City, CA 94404, USA. danielle.porter@gilead.com.
Martin DaeumerSeq-IT GmbH & Co. KG, Pfaffplatz 10, 67655 Kaiserslautern, Germany. m.daeumer@immungenetik-kl.de.
Alexander ThielenSeq-IT GmbH & Co. KG, Pfaffplatz 10, 67655 Kaiserslautern, Germany. a.thielen@immungenetik-kl.de.
Silvia ChangGilead Sciences, 333 Lakeside Drive, Foster City, CA 94404, USA. silvia.chang@gilead.com.
Ross MartinGilead Sciences, 333 Lakeside Drive, Foster City, CA 94404, USA. ross.martin@gilead.com.
Cal CohenGilead Sciences, 333 Lakeside Drive, Foster City, CA 94404, USA. cal.cohen@gilead.com.
Michael D MillerGilead Sciences, 333 Lakeside Drive, Foster City, CA 94404, USA. michael.miller@gilead.com.
Kirsten L WhiteGilead Sciences, 333 Lakeside Drive, Foster City, CA 94404, USA. kirsten.white@gilead.com.
Université Bourgogne Franche-Comté · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

At Week 96 of the Single-Tablet Regimen (STaR) study, more treatment-naïve subjects that received rilpivirine/emtricitabine/tenofovir DF (RPV/FTC/TDF) developed resistance mutations compared to those treated with efavirenz (EFV)/FTC/TDF by population sequencing. Furthermore, more RPV/FTC/TDF-treated subjects with baseline HIV-1 RNA >100,000 copies/mL developed resistance compared to subjects with baseline HIV-1 RNA ≤100,000 copies/mL. Here, deep sequencing was utilized to assess the presence of pre-existing low-frequency variants in subjects with and without resistance development in the STaR study. Deep sequencing (Illumina MiSeq) was performed on baseline and virologic failure samples for all subjects analyzed for resistance by population sequencing during the clinical study (n = 33), as well as baseline samples from control subjects with virologic response (n = 118). Primary NRTI or NNRTI drug resistance mutations present at low frequency (≥2% to 20%) were detected in 6.6% of baseline samples by deep sequencing, all of which occurred in control subjects. Deep sequencing results were generally consistent with population sequencing but detected additional primary NNRTI and NRTI resistance mutations at virologic failure in seven samples. HIV-1 drug resistance mutations emerging while on RPV/FTC/TDF or EFV/FTC/TDF treatment were not present at low frequency at baseline in the STaR study.

Indexed as

Drug Resistance, ViralMutationAdultAnti-HIV AgentsAntiretroviral Therapy, Highly ActiveDeltapapillomavirusFemaleHigh-Throughput Nucleotide SequencingHIV-1HIV InfectionsHumansMaleMiddle AgedReverse Transcriptase InhibitorsRNA, ViralTreatment FailureAnti-HIV AgentsReverse Transcriptase InhibitorsRNA, Viralefavirenzminority variantsresistancerilpivirinevirologic failure

Identifiers

PMID26690199
PMCPMC4690866
OpenAlexW2184899908

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.